R-CMD-check-bioc

R-CMD-check-bioc #87

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10 errors and 11 warnings

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cannot read from connection

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cannot read from connection

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cannot read from connection

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there is no package called 'DiagrammeRsvg'

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This function is not supported for Seurat v5 objects. Consider using `convert_alias_to_symbols` on your original expression matrix and creating a new Seurat object instead.

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there is no package called 'nsga2R'

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This function is not supported for Seurat v5 objects. Consider using `convert_alias_to_symbols` on your original expression matrix and creating a new Seurat object instead.

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cannot read from connection

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This function is not supported for Seurat v5 objects. Consider using `convert_alias_to_symbols` on your original expression matrix and creating a new Seurat object instead.

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This function is not supported for Seurat v5 objects. Consider using `convert_alias_to_symbols` on your original expression matrix and creating a new Seurat object instead.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

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'::' or ':::' imports not declared from:

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get_expressed_genes:

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Missing link or links in documentation object 'get_ligand_target_links_oi.Rd':

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Functions or methods with usage in documentation object 'get_optimized_parameters_nsga2r' but not in code:

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Documented arguments not in \usage in documentation object 'get_lfc_celltype':

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LazyData DB of 5.8 MB without LazyDataCompression set