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Mutational load function (SHM) #536

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Mutational load function (SHM) #536

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Commits on Aug 9, 2024

  1. Added mutational_load function to calculate differences between seque… 

    …nce and germline alignment
    @MKanetscheider
    MKanetscheider committed Aug 9, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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    pre-commit-ci[bot] committed Aug 9, 2024
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Commits on Aug 13, 2024

  1. Merge branch 'scverse:main' into mutational_load

    @MKanetscheider
    MKanetscheider authored Aug 13, 2024
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Commits on Aug 15, 2024

  1. Rewrote mutational_load function based on previous feedback and added… 

    … function to api.rst
    @MKanetscheider
    MKanetscheider committed Aug 15, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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    pre-commit-ci[bot] committed Aug 15, 2024
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  3. Fixed an issue with pre-commit

    @MKanetscheider
    MKanetscheider committed Aug 15, 2024
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  4. Merge branch 'mutational_load' of https://github.com/MKanetscheider/s… 

    …cirpy into mutational_load
    @MKanetscheider
    MKanetscheider committed Aug 15, 2024
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  5. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 15, 2024
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Commits on Aug 18, 2024

  1. Further optimized mutational_load function and formating of docstring… 

    … documentation
    @MKanetscheider
    MKanetscheider committed Aug 18, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 18, 2024
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Commits on Aug 20, 2024

  1. Fixed small issues with the code layout as suggested by grst

    @MKanetscheider
    MKanetscheider committed Aug 20, 2024
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Commits on Aug 26, 2024

  1. Merge branch 'scverse:main' into mutational_load

    @MKanetscheider
    MKanetscheider authored Aug 26, 2024
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  2. Merge branch 'mutational_load' of https://github.com/MKanetscheider/s… 

    …cirpy into mutational_load
    @MKanetscheider
    MKanetscheider committed Aug 26, 2024
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Commits on Aug 29, 2024

  1. Added a first beta-test case, which revealed some bugs that were also… 

    … fixed
    @MKanetscheider
    MKanetscheider committed Aug 29, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 29, 2024
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  3. Specified 'except' condition

    @MKanetscheider
    MKanetscheider committed Aug 29, 2024
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  4. Merge branch 'mutational_load' of https://github.com/MKanetscheider/s… 

    …cirpy into mutational_load
    @MKanetscheider
    MKanetscheider committed Aug 29, 2024
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Commits on Aug 30, 2024

  1. Merge branch 'main' into mutational_load

    @MKanetscheider
    MKanetscheider authored Aug 30, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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    pre-commit-ci[bot] committed Aug 30, 2024
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Commits on Oct 15, 2024

  1. Merge branch 'main' into mutational_load

    @MKanetscheider
    MKanetscheider authored Oct 15, 2024
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Commits on Oct 17, 2024

  1. Add notebook section about somatic hypermutation

    @grst
    grst committed Oct 17, 2024
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