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Speed up anndata writing speed after define_clonotype_clusters #556

Merged
merged 7 commits into from
Nov 6, 2024
Merged

Speed up anndata writing speed after define_clonotype_clusters #556

merged 7 commits into from
Nov 6, 2024

Commits on Sep 17, 2024

  1. convert cell_indices str->array dict to a csr matrix before storing t… 

    …he anndata result
    @felixpetschko
    felixpetschko committed Sep 17, 2024
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Commits on Sep 18, 2024

  1. save cell_indices as json format

    @felixpetschko
    felixpetschko committed Sep 18, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Sep 18, 2024
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  3. removed unused conversion function

    @felixpetschko
    felixpetschko committed Sep 18, 2024
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  4. Merge branch 'result_storage' of https://github.com/felixpetschko/scirpy 

     into result_storage
    @felixpetschko
    felixpetschko committed Sep 18, 2024
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Commits on Nov 6, 2024

  1. Merge branch 'main' into result_storage

    @grst
    grst authored Nov 6, 2024
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  2. Update CHANGELOG

    @grst
    grst committed Nov 6, 2024
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