Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add synthetic data generation functionality #60

Draft
wants to merge 44 commits into
base: main
Choose a base branch
from
Draft

Add synthetic data generation functionality #60

wants to merge 44 commits into from

Conversation

ibevers
Copy link
Contributor

@ibevers ibevers commented Jun 14, 2024

No description provided.

ibevers and others added 30 commits June 14, 2024 12:15
@ibevers
Add synthetic RedCap data generation function
ff83244
@ibevers
Fix CLI bug and add evaluation function for synthetic data
405a0ef
@ibevers
Create version of prepare for synthetic data
331a252
@alistairewj
fixes while running on corpus 3
4cf8333
@ibevers
Comment out column conversion since this was done manually
17ec192
@ibevers
Add non-pydra iterative feature extraction
c3edca8
@ibevers
Add update columns flag
2d7d9ca
@ibevers
Add language code to transcribe to fix bug
5d65f26
@ibevers
Add update_column_names arg to tests
fb61fdc
@alistairewj
rework so non-parallel extraction works and verifies content
d07d229
@alistairewj
add command to validate a BIDS folder has all the extracted features
d5db59b
@alistairewj @ibevers
add command to validate a BIDS folder has all the extracted features
ef57f2a
@ibevers
Add try/except and retry for transcription
c8d099d
@ibevers
Refactor transcription and move inside try
14b53a2
@ibevers
Merge branch 'alistair/corpus_3' into corpus-3-release-fixes
70baeb7
@ibevers
Remove redundant validate_bids_data function
9589071
@ibevers
Remove vestigial test update_redcap_df_column_names
f00353e
@ibevers
Add labels to coded mapping for updating synthetic csv
366a04e
@ibevers
Update wav_path to wav_paths
21247a2
@ibevers
Merge branch 'synthetic-data' into corpus-3-release-fixes
603ced3
@ibevers
Merge pull request #87 from sensein/corpus-3-release-fixes
eac07e9 
Update Synthetic Data Branch
@ibevers
Merge branch 'corpus-3-release-fixes' of https://github.com/sensein/b…
184687b 
…2aiprep into corpus-3-release-fixes
@ibevers
Merge branch 'corpus-3-release-fixes' into synthetic-data
134b24a
@ibevers
Move synthetic data files to synthetic dir
911b925
@ibevers
Fix Pydra workflow
f44cb1c
@ibevers
Merge branch 'corpus-3-release-fixes' into synthetic-data
2b5601e
@ibevers
Add try/except for robustness when not connected to wifi
54673ea
@ibevers
Merge branch 'corpus-3-release-fixes' into synthetic-data
7b74a52
@ibevers
Separate synthesizer fit function from data generation
261b0b8
@ibevers
Update .gitignore
3928279
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
2 participants
@ibevers @alistairewj