v24.8.29

What's Changed

• Update unicycler wrapper by @cokelaer in #111

Full Changelog: v24.2.6...v24.8.29

v24.2.6

What's Changed

• Adding infernal from main sequana-wrappers repo and minor blast makedb fix by @khourhin in #109
• add new wrapper for freebayes-parallel by @cokelaer in #110
• Fix typo in sequana_coverage to use annotation file

Full Changelog: v24.1.14...v24.2.6

v24.1.14

What's Changed

• Fix missing window_size in sequana coverage wrapper by @cokelaer in #108

Full Changelog: v24.1.8...v24.1.14

v24.1.8

What's Changed

• Update CI by @cokelaer in #105
• update unicycler to add long read option by @cokelaer in #107

Full Changelog: v23.12.5...v24.1.8

v23.11.18

What's Changed

• refactor sequana coverage by @cokelaer in #95

Full Changelog: v0.15.2...v23.18.13

v0.15.1

What's Changed

• Get rid of easydev by @cokelaer in #69
• add spades wrapper by @ddesvillechabrol in #70
• add quast wrapper by @ddesvillechabrol in #71
• add prokka wrapper by @ddesvillechabrol in #72
• sambamba tmpdir is optional by @ddesvillechabrol in #73
• set gbk as input by @ddesvillechabrol in #74
• Fix spades, prokka & quast by @ddesvillechabrol in #75
• Fixing sambamba output directory creation by @cokelaer in #76
• roll back previous commit and pin sambamba for test. by @cokelaer in #77
• Refacto blast for denovo/lora by @ddesvillechabrol in #78
• add unicycler wrapper by @ddesvillechabrol in #79
• fix ref alignment by @ddesvillechabrol in #83
• use output prefix in digital norm by @ddesvillechabrol in #84
• mv bamtools to samtools for indexing by @cokelaer in #86
• move bamtools to samtools for indexing by @cokelaer in #87
• rulegraph create dot file by @ddesvillechabrol in #90
• add sequana_taxonomy wrapper by @cokelaer in #91

Full Changelog: sequana_v0.14.1...v0.15.1

v0.14.1

A tag to be used with sequana and sequana pipelines (Aug 2022)

sequana_v0.12

This is a tag for reproducing analysis with sequana_v0.12 and this tag of the wrappers library