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Use zustand store inside suspense fetch store to track progress
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axelboc committed Aug 20, 2024
1 parent 43dfe40 commit 992975c
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Showing 11 changed files with 97 additions and 71 deletions.
2 changes: 1 addition & 1 deletion packages/app/src/__tests__/Explorer.test.tsx
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
import { screen } from '@testing-library/react';
import { expect, test } from 'vitest';

import { SLOW_TIMEOUT } from '../providers/mock/mock-api';
import { SLOW_TIMEOUT } from '../providers/mock/utils';
import { renderApp } from '../test-utils';

test('select root group by default', async () => {
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2 changes: 1 addition & 1 deletion packages/app/src/__tests__/NexusPack.test.tsx
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
import { screen } from '@testing-library/react';
import { expect, test } from 'vitest';

import { SLOW_TIMEOUT } from '../providers/mock/mock-api';
import { SLOW_TIMEOUT } from '../providers/mock/utils';
import {
getSelectedVisTab,
getVisTabs,
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2 changes: 1 addition & 1 deletion packages/app/src/__tests__/Visualizer.test.tsx
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
import { screen } from '@testing-library/react';
import { expect, test } from 'vitest';

import { SLOW_TIMEOUT } from '../providers/mock/mock-api';
import { SLOW_TIMEOUT } from '../providers/mock/utils';
import { mockConsoleMethod, renderApp } from '../test-utils';
import { Vis } from '../vis-packs/core/visualizations';

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5 changes: 0 additions & 5 deletions packages/app/src/providers/DataProvider.tsx
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,6 @@ import type {
AttrName,
AttrValuesStore,
EntitiesStore,
ProgressCallback,
ValuesStore,
} from './models';

Expand All @@ -24,8 +23,6 @@ export interface DataContextValue {

// Undocumented
getExportURL?: DataProviderApi['getExportURL'];
addProgressListener: (cb: ProgressCallback) => void;
removeProgressListener: (cb: ProgressCallback) => void;
getSearchablePaths?: DataProviderApi['getSearchablePaths'];
}

Expand Down Expand Up @@ -92,8 +89,6 @@ function DataProvider(props: PropsWithChildren<Props>) {
valuesStore,
attrValuesStore,
getExportURL: api.getExportURL?.bind(api),
addProgressListener: api.addProgressListener.bind(api),
removeProgressListener: api.removeProgressListener.bind(api),
getSearchablePaths: api.getSearchablePaths?.bind(api),
}}
>
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50 changes: 13 additions & 37 deletions packages/app/src/providers/api.ts
Original file line number Diff line number Diff line change
@@ -1,4 +1,3 @@
/* eslint-disable promise/prefer-await-to-callbacks */
import type {
ArrayShape,
AttributeValues,
Expand All @@ -7,6 +6,7 @@ import type {
ProvidedEntity,
Value,
} from '@h5web/shared/hdf5-models';
import type { OnProgress } from '@h5web/shared/react-suspense-fetch';
import type {
AxiosInstance,
AxiosProgressEvent,
Expand All @@ -16,18 +16,10 @@ import type {
} from 'axios';
import axios from 'axios';

import type {
ExportFormat,
ExportURL,
ProgressCallback,
ValuesStoreParams,
} from './models';
import type { ExportFormat, ExportURL, ValuesStoreParams } from './models';

export abstract class DataProviderApi {
protected readonly client: AxiosInstance;
protected progress = new Map<ValuesStoreParams, number>();

private readonly progressListeners = new Set<ProgressCallback>();

public constructor(
public readonly filepath: string,
Expand All @@ -53,36 +45,25 @@ export abstract class DataProviderApi {

public getSearchablePaths?(path: string): Promise<string[]>;

public addProgressListener(cb: ProgressCallback): void {
this.progressListeners.add(cb);
cb([...this.progress.values()]); // notify once
}

public removeProgressListener(cb: ProgressCallback): void {
this.progressListeners.delete(cb);
}

protected async cancellableFetchValue(
endpoint: string,
storeParams: ValuesStoreParams,
queryParams: Record<string, string | boolean | undefined>,
signal?: AbortSignal,
onProgress?: OnProgress,
responseType?: ResponseType,
): Promise<AxiosResponse> {
this.progress.set(storeParams, 0);
this.notifyProgressChange();

try {
return await this.client.get(endpoint, {
signal,
params: queryParams,
responseType,
onDownloadProgress: (evt: AxiosProgressEvent) => {
if (evt.total !== undefined && evt.total > 0) {
this.progress.set(storeParams, evt.loaded / evt.total);
this.notifyProgressChange();
}
},
onDownloadProgress:
onProgress &&
((evt: AxiosProgressEvent) => {
if (evt.total !== undefined && evt.total > 0) {
onProgress(evt.loaded / evt.total);
}
}),
});
} catch (error) {
if (axios.isCancel(error)) {
Expand All @@ -93,21 +74,16 @@ export abstract class DataProviderApi {
);
}
throw error;
} finally {
// Remove progress when request fulfills
this.progress.delete(storeParams);
this.notifyProgressChange();
}
}

private notifyProgressChange() {
this.progressListeners.forEach((cb) => cb([...this.progress.values()]));
}

public abstract getEntity(path: string): Promise<ProvidedEntity>;

public abstract getValue(
params: ValuesStoreParams,
signal?: AbortSignal,
onProgress?: OnProgress,
): Promise<unknown>;

public abstract getAttrValues(entity: Entity): Promise<AttributeValues>;
}
21 changes: 16 additions & 5 deletions packages/app/src/providers/h5grove/h5grove-api.ts
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@ import type {
Value,
} from '@h5web/shared/hdf5-models';
import { DTypeClass } from '@h5web/shared/hdf5-models';
import type { OnProgress } from '@h5web/shared/react-suspense-fetch';
import type { AxiosRequestConfig } from 'axios';

import { DataProviderApi } from '../api';
Expand Down Expand Up @@ -44,21 +45,29 @@ export class H5GroveApi extends DataProviderApi {
public override async getValue(
params: ValuesStoreParams,
signal?: AbortSignal,
onProgress?: OnProgress,
): Promise<H5GroveDataResponse> {
const { dataset } = params;

if (dataset.type.class === DTypeClass.Opaque) {
return new Uint8Array(await this.fetchBinaryData(params, signal));
return new Uint8Array(
await this.fetchBinaryData(params, signal, onProgress),
);
}

const DTypedArray = h5groveTypedArrayFromDType(dataset.type);
if (DTypedArray) {
const buffer = await this.fetchBinaryData(params, signal, true);
const buffer = await this.fetchBinaryData(
params,
signal,
onProgress,
true,
);
const array = new DTypedArray(buffer);
return hasScalarShape(dataset) ? array[0] : array;
}

return this.fetchData(params, signal);
return this.fetchData(params, signal, onProgress);
}

public override async getAttrValues(
Expand Down Expand Up @@ -146,16 +155,17 @@ export class H5GroveApi extends DataProviderApi {
private async fetchData(
params: ValuesStoreParams,
signal?: AbortSignal,
onProgress?: OnProgress,
): Promise<H5GroveDataResponse> {
const { data } = await this.cancellableFetchValue(
`/data/`,
params,
{
path: params.dataset.path,
selection: params.selection,
flatten: true,
},
signal,
onProgress,
);

return data;
Expand All @@ -164,18 +174,19 @@ export class H5GroveApi extends DataProviderApi {
private async fetchBinaryData(
params: ValuesStoreParams,
signal?: AbortSignal,
onProgress?: OnProgress,
safe = false,
): Promise<ArrayBuffer> {
const { data } = await this.cancellableFetchValue(
'/data/',
params,
{
path: params.dataset.path,
selection: params.selection,
format: 'bin',
dtype: safe ? 'safe' : undefined,
},
signal,
onProgress,
'arraybuffer',
);

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7 changes: 5 additions & 2 deletions packages/app/src/providers/hsds/hsds-api.ts
Original file line number Diff line number Diff line change
Expand Up @@ -17,6 +17,7 @@ import type {
} from '@h5web/shared/hdf5-models';
import { EntityKind } from '@h5web/shared/hdf5-models';
import { buildEntityPath, getChildEntity } from '@h5web/shared/hdf5-utils';
import type { OnProgress } from '@h5web/shared/react-suspense-fetch';

import { DataProviderApi } from '../api';
import type { ExportFormat, ExportURL, ValuesStoreParams } from '../models';
Expand Down Expand Up @@ -127,11 +128,12 @@ export class HsdsApi extends DataProviderApi {
public override async getValue(
params: ValuesStoreParams,
signal?: AbortSignal,
onProgress?: OnProgress,
): Promise<unknown> {
const { dataset } = params;
assertHsdsDataset(dataset);

const value = await this.fetchValue(dataset.id, params, signal);
const value = await this.fetchValue(dataset.id, params, signal, onProgress);

// https://github.com/HDFGroup/hsds/issues/88
// HSDS does not reduce the number of dimensions when selecting indices
Expand Down Expand Up @@ -217,13 +219,14 @@ export class HsdsApi extends DataProviderApi {
entityId: HsdsId,
params: ValuesStoreParams,
signal?: AbortSignal,
onProgress?: OnProgress,
): Promise<HsdsValueResponse> {
const { selection } = params;
const { data } = await this.cancellableFetchValue(
`/datasets/${entityId}/value`,
params,
{ select: selection && `[${selection}]` },
signal,
onProgress,
);
return data.value;
}
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31 changes: 15 additions & 16 deletions packages/app/src/vis-packs/ValueLoader.tsx
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
import { useTimeoutEffect, useToggle } from '@react-hookz/web';
import { useEffect, useState } from 'react';
import { useStore } from 'zustand';

import { useDataContext } from '../providers/DataProvider';
import { CANCELLED_ERROR_MSG } from '../providers/utils';
Expand All @@ -13,20 +13,15 @@ interface Props {

function ValueLoader(props: Props) {
const { isSlice = false } = props;
const { valuesStore, addProgressListener, removeProgressListener } =
useDataContext();

const [progress, setProgress] = useState<number[]>();

useEffect(() => {
addProgressListener(setProgress);
return () => removeProgressListener(setProgress);
}, [addProgressListener, removeProgressListener, setProgress]);
const { valuesStore } = useDataContext();

// Wait a bit before showing loader to avoid flash
const [isReady, toggleReady] = useToggle();
useTimeoutEffect(toggleReady, 100);

// Track progress
const { ongoing } = useStore(valuesStore.progressStore);

return (
<div className={styles.loader} data-testid="LoadingDatasetValue">
{isReady && (
Expand All @@ -42,13 +37,17 @@ function ValueLoader(props: Props) {
<div />
<div />
</div>
{progress && (
<div className={styles.progressBars}>
{progress.slice(0, MAX_PROGRESS_BARS).map((val, index) => (
<progress className={styles.progress} key={index} value={val} /> // eslint-disable-line react/no-array-index-key
<div className={styles.progressBars}>
{[...ongoing.entries()]
.slice(0, MAX_PROGRESS_BARS)
.map(([key, val]) => (
<progress
className={styles.progress}
key={`${key.dataset.path}_${key.selection || ''}`}
value={val}
/>
))}
</div>
)}
</div>
<p>{isSlice ? 'Loading current slice' : 'Loading data'}...</p>
<p>
<button
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3 changes: 3 additions & 0 deletions packages/shared/package.json
Original file line number Diff line number Diff line change
Expand Up @@ -35,6 +35,9 @@
"ndarray-ops": "1.2.2",
"react": ">=18"
},
"optionalDependencies": {
"zustand": "4.5.4"
},
"devDependencies": {
"@types/d3-array": "~3.2.1",
"@types/d3-format": "~3.0.4",
Expand Down
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