** GETTING STARTED

Creating a README file for the Small Brain Records repository, based on the information provided and the nature of the project, could look something like this:

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Small Brain Records Project

Introduction

Welcome to the Small Brain Records (SBR) Project repository. SBR is an innovative, open-source clinical system designed to revolutionize patient-clinician collaboration in healthcare. Our system focuses on generating machine-learning-friendly labeled data, embedding clinical decision support (CDS) in the right context, and empowering clinicians to deliver outstanding care.

Features

• Problem-Task Ontology: Facilitates meaningful interactions between patients and clinicians.
• Machine Learning Data Generation: Automatically generates labeled data for advanced analytics.
• Context-Aware CDS: Integrates CDS into the clinical workflow at appropriate times.
• Audio Recording and Labeling: Captures and labels clinical encounter audio for enhanced data richness.

Getting Started

• Prerequisites: List the software and hardware requirements.
• Installation: Step-by-step guide to set up the SBR project.
• Configuration: Instructions for configuring the system to suit specific clinical environments.

Usage

Detailed instructions on how to use the system in a clinical setting, including case studies or usage scenarios.

Contribution

Guidelines for contributing to the SBR project, including coding standards, pull request process, and issue reporting.

Support and Community

Information on how to obtain support, join the community discussions, and collaborate with other users and developers.

License

This project is licensed under the AGPL-3.0 license - see the LICENSE file for details.

Acknowledgments

Special thanks to the project's lead contributors, advisors, and all who have supported the development of the SBR project.

For more information, visit smallbrainrecords.org.

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This template provides a general structure for the README file, which can be customized further based on specific details and features of the SBR project.

Run mysql server using docker enviroment

docker run -d -e MYSQL_ROOT_PASSWORD=root -p 3306:3306 -v D:\Workspace\database\smallbrain:/var/lib/mysql mysql:5.7.22 --sql_mode=""

NOTE for updating to Django 1.11 and other dependencies(django-reversion):

1. Run python manage.py migrate reversion --fake
2. Add column db VARCHAR(191) to table reversion_version

** TEST COVERAGE **

1. project
2. users_app
3. common
4. emr
5. generic
6. problems_app
7. todo_app
8. data_app
9. a1c_app
10. colons_app
11. goals_app
12. document_app
13. encounters_app
14. inr_app
15. medication_app
16. pain
17. my_story_app
18. project_admin_app
19. site_pages_app

Admin functions

Manage users

• Add user
• Edit user
• Deactive user

Patient Administration