fix: improve Neo4j admin import dry run script #47
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| name: Continuous Integration | |
| on: | |
| push: | |
| branches: [dev] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| pytest: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.12"] | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: pip3 install --upgrade setuptools pip | |
| - name: Install sg | |
| run: python3 -m pip install -e .[ci] | |
| - name: Install hmmer | |
| run: sudo apt-get install hmmer | |
| - name: Run tests | |
| run: pytest tests -v | |
| flake8: | |
| name: flake8 | |
| runs-on: ubuntu-latest | |
| if: ${{ !contains(github.event.head_commit, 'ci skip') || !contains(github.event.head_commit, 'from socialgene/release-please') }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - run: python -m pip install flake8 | |
| - run: flake8 --ignore E203,E501,W503 | |
| black: | |
| runs-on: ubuntu-latest | |
| if: ${{ !contains(github.event.head_commit, 'ci skip') || !contains(github.event.head_commit, 'from socialgene/release-please') }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: black | |
| uses: psf/black@stable |