fixing blob radius calculation in 2d (#2023)

spacetx · Oct 12, 2024 · 52a65e4 · 52a65e4
1 parent ec2697c
commit 52a65e4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/starfish/core/spots/FindSpots/blob.py b/starfish/core/spots/FindSpots/blob.py
@@ -147,7 +147,7 @@ def image_to_spots(
             z_inds = np.asarray([0 for x in range(len(fitted_blobs_array))])
             y_inds = fitted_blobs_array[:, 0].astype(int)
             x_inds = fitted_blobs_array[:, 1].astype(int)
-            radius = np.round(fitted_blobs_array[:, 2] * np.sqrt(3))
+            radius = np.round(fitted_blobs_array[:, 2] * np.sqrt(2))
             intensities = data_image[tuple([y_inds, x_inds])]
 
         # construct dataframe