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@dfci @ECMWFCode4Earth @wikilimo @HaghverdiLab @ls-ludwig-lab

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Stars

Courses

56 repositories

A comprehensive tutorial about GWAS and PRS

888 337 Updated Apr 1, 2023

The website for a semester-long 'do-it-yourself' (DIY) transcriptomics course

HTML 23 7 Updated Apr 16, 2025

Analysis of single cell RNA-seq data course

TeX 674 361 Updated Apr 11, 2022

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

Jupyter Notebook 1,474 473 Updated Dec 11, 2022

A repository for GeneLab Training documentation.

HTML 34 13 Updated Jan 28, 2025

Code and data repository for the 2020 physalia course on single cell RNA sequencing.

Shell 57 39 Updated Apr 15, 2020

Workshops presented by the Gladstone Bioinformatics Core

HTML 223 74 Updated Apr 11, 2025

Short lessons from FAS Informatics coffee hour

HTML 150 48 Updated Jul 6, 2023

Computational Biology- Spring 2021

TeX 46 6 Updated Nov 1, 2021

The official repository of the Bioconductor 2019 Conference Workshops 🎊

Dockerfile 25 15 Updated Mar 15, 2023

Course materials for BIOST561

R 269 70 Updated Jun 5, 2019

Applied Computational Genomics Course at UU: Spring 2020

HTML 969 215 Updated Apr 5, 2024
TeX 360 311 Updated Sep 9, 2024

Course Materials

Jupyter Notebook 1 10 Updated Jan 25, 2021

A collection of Galaxy-related training material

HTML 330 952 Updated May 2, 2025

Genomics Workshop Overview

46 100 Updated Apr 29, 2025

Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/

Nextflow 18 7 Updated Mar 24, 2019

VIP cheatsheets for Stanford's CS 230 Deep Learning

6,549 1,361 Updated May 20, 2020

VIP cheatsheets for Stanford's CS 229 Machine Learning

18,139 4,010 Updated May 20, 2020

Data science for statisticians workshop

150 30 Updated Feb 7, 2020

Repository of teaching materials, code, and data for my data analysis and machine learning projects.

Jupyter Notebook 6,288 2,078 Updated Jun 21, 2023

List of Computer Science courses with video lectures.

68,614 9,285 Updated Apr 30, 2025

HGI's materials for the EBI Next Generation Sequencing (NGS) workshop

TeX 1 Updated Oct 5, 2018

Code and examples for JHU Computational Genomics class

Jupyter Notebook 301 111 Updated Oct 22, 2024

Materials for short, half-day workshops

Jupyter Notebook 328 150 Updated Apr 15, 2025

Nextflow + Docker tutorial material

23 6 Updated Oct 24, 2017

Compiled and pretty version of labs

197 128 Updated Apr 10, 2020

Code samples for my book "Neural Networks and Deep Learning"

Python 16,641 6,793 Updated Jun 2, 2024

Notebooks and code for the book "Introduction to Machine Learning with Python"

Jupyter Notebook 7,692 4,628 Updated Mar 14, 2024

Postdocs and Graduate Students Visit NCBI for 4 to 6 weeks for Training in Bioinformatics, Computational Biology, Data Science, Project Management and Product Management

2 1 Updated May 1, 2018