Large scale functional screen identifies genetic variants with splicing effects in modern and archaic humans
Updated: 2023-03-15. Contact: Stephen Rong.
This repository contains the custom scripts for the manuscript titled "Large scale functional screen identifies genetic variants with splicing effects in modern and archaic humans".
mapsy_oligo_pipeline/: This repository contains the scripts for generating the oligo sequences for the Neanderthal MaPSy experiments.
mapsy_seq_pipeline/: This repository contains scripts for analyzing NGS data from the Neanderthal MaPSy experiments.
analysis_archaic_splicing/: This repository contains the scripts for reproducing the analyses, tables, and figures in the manuscript.