Merge pull request #284 from sunpy/par

metadata for parallel_read_safe
sunpy · Aug 8, 2024 · 0cf1430 · 0cf1430
2 parents c6bca84 + 183f6ff
commit 0cf1430
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Showing 54 changed files with 697 additions and 910 deletions.
diff --git a/.codecov.yaml b/.codecov.yaml
@@ -0,0 +1,8 @@
+codecov:
+  token: a0dfd87f-8eb9-4a41-9e4e-a06919f216cd
+comment: off
+coverage:
+  status:
+    project:
+      default:
+        threshold: 0.2%
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -3,23 +3,23 @@ name: CI
 on:
   push:
     branches:
-      - 'main'
-      - '*.*'
-      - '!*backport*'
+      - "main"
+      - "*.*"
+      - "!*backport*"
     tags:
-      - 'v*'
-      - '!*dev*'
-      - '!*pre*'
-      - '!*post*'
+      - "v*"
+      - "!*dev*"
+      - "!*pre*"
+      - "!*post*"
   pull_request:
   workflow_dispatch:
   schedule:
-      #        ┌───────── minute (0 - 59)
-      #        │ ┌───────── hour (0 - 23)
-      #        │ │ ┌───────── day of the month (1 - 31)
-      #        │ │ │ ┌───────── month (1 - 12 or JAN-DEC)
-      #        │ │ │ │ ┌───────── day of the week (0 - 6 or SUN-SAT)
-      - cron: '0 7 * * *'  # Every day at 07:00 UTC
+    #        ┌───────── minute (0 - 59)
+    #        │ ┌───────── hour (0 - 23)
+    #        │ │ ┌───────── day of the month (1 - 31)
+    #        │ │ │ ┌───────── month (1 - 12 or JAN-DEC)
+    #        │ │ │ │ ┌───────── day of the week (0 - 6 or SUN-SAT)
+    - cron: "0 7 * * *" # Every day at 07:00 UTC
 
 concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}
@@ -36,7 +36,7 @@ jobs:
         - pandoc
         - graphviz
       envs: |
-        - linux: py312-sphinx7
+        - linux: py312-sphinx8
     secrets:
       CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
@@ -57,17 +57,18 @@ jobs:
             - pandoc
             - graphviz
       envs: |
-        - linux: py311-sphinx6
-        - macos: py310-sphinx5
-        - windows: py39-sphinx5
+        - macos: py311-sphinx7
+        - windows: py310-sphinx7
+        - linux: py310-sphinx6
+        - linux: py312-pydata-sphinx-theme
+        - linux: py312-devdeps
     secrets:
       CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
-  docs:
-    needs: [core]
+  extras:
+    needs: [tests]
     uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@main
     with:
-      default_python: '3.9'
       submodules: false
       pytest: false
       libraries: |
@@ -76,9 +77,11 @@ jobs:
             - graphviz
       envs: |
         - linux: py312-docs
+        - linux: pydata-sphinx-theme-dev
+        - linux: py312-linkcheck
 
   conda:
-    needs: [core]
+    needs: [tests]
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
@@ -100,19 +103,3 @@ jobs:
           conda list
           pytest -vvv -r a --pyargs ablog
           make tests
-
-  extras:
-    needs: [tests]
-    uses: OpenAstronomy/github-actions-workflows/.github/workflows/tox.yml@main
-    with:
-      default_python: '3.9'
-      submodules: false
-      coverage: codecov
-      libraries: |
-        apt:
-            - pandoc
-            - graphviz
-      envs: |
-        - linux: py312-sphinxdev
-    secrets:
-      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
diff --git a/.github/workflows/pythonpublish.yml b/.github/workflows/pythonpublish.yml
@@ -8,19 +8,19 @@ jobs:
   deploy:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v3
-    - name: Set up Python
-      uses: actions/setup-python@v4
-      with:
-        python-version: '3.x'
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        python -m pip install -U --user --force-reinstall pep517 setuptools_scm twine
-    - name: Build and publish
-      env:
-        TWINE_USERNAME: __token__
-        TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
-      run: |
-        python -m pep517.build --binary --source --out-dir wheelhouse .
-        python -m twine upload --skip-existing wheelhouse/*
+      - uses: actions/checkout@v3
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: "3.x"
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          python -m pip install -U --user --force-reinstall pep517 setuptools_scm twine
+      - name: Build and publish
+        env:
+          TWINE_USERNAME: __token__
+          TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
+        run: |
+          python -m pep517.build --binary --source --out-dir wheelhouse .
+          python -m twine upload --skip-existing wheelhouse/*
diff --git a/.gitignore b/.gitignore
@@ -63,9 +63,6 @@ instance/
 # Scrapy stuff:
 .scrapy
 
-# Sphinx documentation
-docs/_build/
-
 # PyBuilder
 target/
 
@@ -138,24 +135,10 @@ Icon
 
 ### MacOS: https://raw.githubusercontent.com/github/gitignore/master/Global/macOS.gitignore
 
-# General
-.DS_Store
-.AppleDouble
-.LSOverride
-
-# Icon must end with two \r
-Icon
-
-
-# Thumbnails
-._*
-
 # Files that might appear in the root of a volume
 .DocumentRevisions-V100
 .fseventsd
-.Spotlight-V100
 .TemporaryItems
-.Trashes
 .VolumeIcon.icns
 .com.apple.timemachine.donotpresent
 
@@ -195,29 +178,14 @@ $RECYCLE.BIN/
 ### VScode: https://raw.githubusercontent.com/github/gitignore/master/Global/VisualStudioCode.gitignore
 .vscode/*
 
-### Extra Python Items and SunPy Specific
-.hypothesis
-.pytest_cache
-sunpydata.sqlite
-sunpydata.sqlite-journal
-sunpy/_compiler.c
-sunpy/cython_version.py
-docs/_build
-docs/generated
-docs/api/
-docs/whatsnew/latest_changelog.txt
-examples/**/*.asdf
-# This is incase you run the figure tests
-figure_test_images*
-tags
-
 ### Pycharm(?)
 .idea
 
-# Release script
+# Ablog
 .github_cache
-
+src/ablog/version.py
 docs/_build/
+docs/api/
 docs/.doctrees/
 docs/_website/
 docs/_latex/
@@ -226,5 +194,4 @@ test/
 .history/
 pydata-sphinx-theme/
 _build
-_version.py
 demo/
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -1,47 +1,54 @@
 ci:
-    autofix_prs: false
-    autoupdate_schedule: "quarterly"
+  autofix_prs: false
+  autoupdate_schedule: "quarterly"
 repos:
--   repo: https://github.com/PyCQA/autoflake
-    rev: v2.3.1
+  - repo: https://github.com/PyCQA/docformatter
+    rev: v1.7.5
     hooks:
-    -   id: autoflake
-        args: ['--in-place', '--remove-all-unused-imports', '--remove-unused-variable']
--   repo: https://github.com/PyCQA/isort
-    rev: 5.13.2
+      - id: docformatter
+        args: ["--in-place", "--pre-summary-newline", "--make-summary-multi"]
+  - repo: https://github.com/PyCQA/autoflake
+    rev: v2.3.1
     hooks:
-    - id: isort
--   repo: https://github.com/psf/black
-    rev: 24.4.2
+      - id: autoflake
+        args:
+          [
+            "--in-place",
+            "--remove-all-unused-imports",
+            "--remove-unused-variable",
+          ]
+        exclude: ".*(.fits|.fts|.fit|.txt|tca.*|extern.*|.rst|.md|docs/conf.py)$"
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: "v0.5.0"
     hooks:
-    - id: black
--   repo: https://github.com/pre-commit/pre-commit-hooks
+      - id: ruff
+        args: ["--fix", "--unsafe-fixes"]
+      - id: ruff-format
+  - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v4.6.0
     hooks:
-    - id: check-ast
-    - id: check-case-conflict
-    - id: trailing-whitespace
-    - id: mixed-line-ending
-    - id: end-of-file-fixer
-    - id: check-yaml
-    - id: debug-statements
--   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: 'v0.4.2'
+      - id: check-ast
+      - id: check-case-conflict
+      - id: trailing-whitespace
+        exclude: ".*(.fits|.fts|.fit|.txt|.csv)$"
+      - id: mixed-line-ending
+        exclude: ".*(.fits|.fts|.fit|.txt|.csv)$"
+      - id: end-of-file-fixer
+        exclude: ".*(.fits|.fts|.fit|.txt|.csv)$"
+      - id: check-yaml
+      - id: debug-statements
+  - repo: https://github.com/codespell-project/codespell
+    rev: v2.3.0
     hooks:
-      - id: ruff
-        args: ['--fix']
--   repo: https://github.com/awebdeveloper/pre-commit-stylelint
-    rev: '0.0.2'
+      - id: codespell
+        additional_dependencies:
+          - tomli
+  - repo: https://github.com/rbubley/mirrors-prettier
+    rev: v3.3.3
     hooks:
-    -   id: stylelint
-        additional_dependencies: ['[email protected]', '[email protected]']
--   repo: https://github.com/pre-commit/mirrors-prettier
-    rev: v4.0.0-alpha.8
+      - id: prettier
+  - repo: https://github.com/Riverside-Healthcare/djLint
+    rev: v1.34.1
     hooks:
-    -   id: prettier
-        types_or: [css, scss, javascript]
-- repo: https://github.com/Riverside-Healthcare/djLint
-  rev: v1.34.1
-  hooks:
-    - id: djlint-jinja
-      types_or: ["html"]
+      - id: djlint-jinja
+        types_or: ["html"]
diff --git a/.readthedocs.yml b/.readthedocs.yml
@@ -1,8 +1,8 @@
 version: 2
 build:
-  os: ubuntu-22.04
+  os: ubuntu-lts-latest
   tools:
-    python: "mambaforge-4.10"
+    python: "mambaforge-latest"
   jobs:
     pre_install:
       - git update-index --assume-unchanged .rtd-environment.yml docs/conf.py
@@ -13,9 +13,9 @@ sphinx:
   configuration: docs/conf.py
   fail_on_warning: false
 python:
-   install:
-     - method: pip
-       extra_requirements:
+  install:
+    - method: pip
+      extra_requirements:
         - all
         - docs
-       path: .
+      path: .
diff --git a/.rtd-environment.yml b/.rtd-environment.yml
@@ -2,7 +2,7 @@ name: rtd_ablog
 channels:
   - conda-forge
 dependencies:
-  - python=3.10
+  - python=3.12
   - pip
   - graphviz
   - make

diff --git a/.stylelintrc.json b/.stylelintrc.json
@@ -1,3 +1,3 @@
 {
-    "extends": "stylelint-config-standard"
+  "extends": "stylelint-config-standard"
 }
diff --git a/Makefile b/Makefile
@@ -8,21 +8,21 @@ rebuild:
 	cd docs; watchmedo shell-command --patterns='*.rst' --command='ablog build' --recursive
 
 test:
-	set -e; cd docs; ablog build -T -W; git clean -xfd; cd ..
+	set -e; cd docs; git clean -xfd; ablog build -T -W; git clean -xfd; cd ..
 
 test1:
-	set -e; cd docs; ablog build -T -W -b json; git clean -xfd; cd ..
+	set -e; cd docs; git clean -xfd; ablog build -T -W -b json; git clean -xfd; cd ..
 
 test2:
-	set -e; cd docs; ablog build -T -W -b pickle; git clean -xfd; cd ..
+	set -e; cd docs; git clean -xfd; ablog build -T -W -b pickle; git clean -xfd; cd ..
 
 test3:
-	set -e; mkdir -p test; cd test; printf "\nABlog\nABlog Team\nhttps://ablog.readthedocs.io/" | ablog start; ablog build -W; cd ..; rm -rf test
+	set -e; mkdir -p test; cd test; git clean -xfd; printf "\nABlog\nABlog Team\nhttps://ablog.readthedocs.io/" | ablog start; ablog build -W; cd ..; rm -rf test
 
 test4:
-	set -e; mkdir -p testablog; cd testablog; printf "\nABlog\nABlog Team\nhttps://ablog.readthedocs.io/" | ablog start; ablog build -W; cd ..; rm -rf testablog
+	set -e; mkdir -p testablog; cd testablog; git clean -xfd; printf "\nABlog\nABlog Team\nhttps://ablog.readthedocs.io/" | ablog start; ablog build -W; cd ..; rm -rf testablog
 
 test5:
-	set -e; cd docs; ablog build -W -b latex -T -d .doctrees -w _latex; git clean -xfd; cd ..
+	set -e; cd docs; git clean -xfd; ablog build -W -b latex -T -d .doctrees -w _latex; git clean -xfd; cd ..
 
 tests: test test1 test2 test3 test4 test5