Analysis scripts for smlm data analysis of myc proteins.
This code is a supplement to the publication Solvie et al. 2022.
The analysis code is presented as Jupyter notebooks that make use of python 3.9, locan 3.10 and python-based libraries as outlined in the requirements.in or environment.yml files.
Requirements files with frozen version numbers are provided.
You can install all packages in a conda environment (we recommend using mamba)
mamba env create --file py39-environment.yml
or via pip
pip install -r py39-requirements.txt --no-deps
Distributed under the terms of the BSD-3 license, this code is free and open source software.