Merge pull request #111 from NataliaFlorekova/model_231

Added model 231 - breast cancer signaling pathways

bnet_to_aeon.py

@@ -2,4 +2,4 @@
 import sys
 
 bn = BooleanNetwork.from_file(sys.argv[1])
-print(bn.to_aeon())
+print(bn.to_aeon())

models/[id-231]__[var-110]__[in-7]__[BREAST-CANCER-SIGNALLING-PATHWAYS]/README.md

@@ -0,0 +1,37 @@
+# \[231\] BREAST-CANCER-SIGNALLING-PATHWAYS
+
+ - Variables: 110
+ - Inputs: 7
+ - Regulations: 268
+ - Publication: https://doi.org/10.1371/journal.pone.0298788
+ - Source: https://github.com/Ktaoma/BoolSyn
+ - Keywords: source (?), curated (?), repaired (?), multi-valued (?)
+
+
+### Modifications
+
+Rows deleted from the model:
+
+DLL_i, DLL_i
+IGF1, IGF1
+NRG1, NRG1
+PG, PG
+ES, ES
+EGF, EGF
+INS, INS
+
+
+### Model citation
+
+```
+@article{bbm-231,
+	author = {Taoma, Kittisak and Ruengjitchatchawalya, Marasri and Liangruksa, Monrudee and Laomettachit, Teeraphan},
+	year = {2024},
+	doi = {https://doi.org/10.1371/journal.pone.0298788},
+	title = {Boolean modeling of breast cancer signaling pathways uncovers mechanisms of drug synergy},
+	publisher = {PLOS ONE}
+}
+
+
+```
+

models/[id-231]__[var-110]__[in-7]__[BREAST-CANCER-SIGNALLING-PATHWAYS]/metadata.json

@@ -0,0 +1,17 @@
+{
+    "id": 231,
+    "name": "BREAST-CANCER-SIGNALLING-PATHWAYS",
+    "url-publication": "https://doi.org/10.1371/journal.pone.0298788",
+    "url-model": "https://github.com/Ktaoma/BoolSyn",
+    "keywords": [
+        "source (?)",
+        "curated (?)",
+        "repaired (?)",
+        "multi-valued (?)"
+    ],
+    "variables": 110,
+    "inputs": 7,
+    "regulations": 268,
+    "notes": "### Modifications\n\nRows deleted from the model:\n\nDLL_i, DLL_i\nIGF1, IGF1\nNRG1, NRG1\nPG, PG\nES, ES\nEGF, EGF\nINS, INS\n",
+    "bib": "@article{bbm-231,\n\tauthor = {Taoma, Kittisak and Ruengjitchatchawalya, Marasri and Liangruksa, Monrudee and Laomettachit, Teeraphan},\n\tyear = {2024},\n\tdoi = {https://doi.org/10.1371/journal.pone.0298788},\n\ttitle = {Boolean modeling of breast cancer signaling pathways uncovers mechanisms of drug synergy},\n\tpublisher = {PLOS ONE}\n}\n\n"
+}