Merge branch 'NataliaFlorekova-model_233'

.gitignore

@@ -6,4 +6,6 @@ __pycache__
 
 # Default output of the bundle.py script
 bbm-edition
-edition-*
+edition-*
+
+venv

models/[id-233]__[var-109]__[in-8]__[BREAST-CANCER-SIGNALLING-PATHWAYS-T47D-COMPLETE]/README.md

@@ -0,0 +1,37 @@
+# \[233\] BREAST-CANCER-SIGNALLING-PATHWAYS-T47D-COMPLETE
+
+ - Variables: 109
+ - Inputs: 8
+ - Regulations: 260
+ - Publication: https://doi.org/10.1371/journal.pone.0298788
+ - Source: https://github.com/Ktaoma/BoolSyn
+ - Keywords: source (?), curated (?), repaired (?), multi-valued (?)
+
+
+### Modifications
+
+Removed regulations:
+WNT1, WNT1
+PG, PG
+NRG1, NRG1
+INS, INS
+IGF1, IGF1
+ES, ES
+EGF, EGF
+DLL_i, DLL_i
+
+
+### Model citation
+
+```
+@article{bbm-233,
+	author = {Taoma, Kittisak and Ruengjitchatchawalya, Marasri and Liangruksa, Monrudee and Laomettachit, Teeraphan},
+	year = {2024},
+	doi = {https://doi.org/10.1371/journal.pone.0298788},
+	title = {Boolean modeling of breast cancer signaling pathways uncovers mechanisms of drug synergy},
+	publisher = {PLOS ONE}
+}
+
+
+```
+

models/[id-233]__[var-109]__[in-8]__[BREAST-CANCER-SIGNALLING-PATHWAYS-T47D-COMPLETE]/metadata.json

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+{
+    "id": 233,
+    "name": "BREAST-CANCER-SIGNALLING-PATHWAYS-T47D-COMPLETE",
+    "url-publication": "https://doi.org/10.1371/journal.pone.0298788",
+    "url-model": "https://github.com/Ktaoma/BoolSyn",
+    "keywords": [
+        "source (?)",
+        "curated (?)",
+        "repaired (?)",
+        "multi-valued (?)"
+    ],
+    "variables": 109,
+    "inputs": 8,
+    "regulations": 260,
+    "notes": "### Modifications\n\nRemoved regulations:\nWNT1, WNT1\nPG, PG\nNRG1, NRG1\nINS, INS\nIGF1, IGF1\nES, ES\nEGF, EGF\nDLL_i, DLL_i\n",
+    "bib": "@article{bbm-233,\n\tauthor = {Taoma, Kittisak and Ruengjitchatchawalya, Marasri and Liangruksa, Monrudee and Laomettachit, Teeraphan},\n\tyear = {2024},\n\tdoi = {https://doi.org/10.1371/journal.pone.0298788},\n\ttitle = {Boolean modeling of breast cancer signaling pathways uncovers mechanisms of drug synergy},\n\tpublisher = {PLOS ONE}\n}\n\n"
+}