MNXref: Reconciliation of metabolites and biochemical reactions for metabolic networks
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Updated
Mar 8, 2018
MNXref: Reconciliation of metabolites and biochemical reactions for metabolic networks
This repository contains several utility functions for MS based metabolomics
Metabolomics Feature Identification Report Industry Standards from BioNovoGene Corporation
Metfrag for Galaxy
Application for the handling and simplification of putative annotations in untargeted metabolomics analysis based on LC/ESI-MS
A computational tool for the prediction and identification of metabolites.
Provide APIs to facilitate the integration of various libraries into BioTransformer.
Code, Data and Results of the publication: "Probabilistic Framework for Integration of Tandem-Mass Spectrum and Retention Time Information in Small Molecule Identification" by Bach et al. 2020
Galaxy tools for BEAMSpy: Birmingham mEtabolite Annotation for Mass SpectroMetry (Python Package)
BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
MicrobeRX
Metabolite Peak List Merge, Annotation & Polishing Tool: A user friendly, platform independent R tool to merge, annotate and polish metabolite-peak list data from LC-/GCMS runs
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