Syndeo allow users to run massively parallel jobs using Ray on SLURM using secure containerization with Apptainer.
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Updated
Sep 26, 2024 - Shell
Syndeo allow users to run massively parallel jobs using Ray on SLURM using secure containerization with Apptainer.
SPECHT is a Julia implementation of a contrastive weakly supervised object detection and identification method for fluorescence microscopy.
Apptainer: Application containers for Linux
The Singularity Community Catalog of Singularity* recipe files.
Generate custom Docker and Singularity images, and minimize existing containers
NYU Langone Genome PACT (Genome Profiling of Actionable Cancer Targets) targeted exome sequencing analysis pipeline.
Container manager for E4S
Data analysis for the experiment E15190-E14030 at the National Superconducting Cyclotron Laboratory (NSCL), currently known as the Facility for Rare Isotope Beams (FRIB). This experiment aims to constrain the nuclear equation of state with heavy ion collisions at intermediate energies.
MATLAB environment for HPC clusters at CSC.
Lightweight bioinformatics pipeline for microbial genome recovery
Apptainer in Docker!
ISC 2023 -- Getting Started with Containers on HPC
Detection and classfication of short tandem repeats in read data
BIDS app for NeuroData's MRI to Graphs pipeline
Physics-Informed Neural Network, Finite Element Method enhanced neural network, and FEM data-based neural network
Approximate layers - TensorFlow extension
LEGEND Data Production Environment
Container recipes created by the RCP team
Python based plotting package for CASA MeasurementSet
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