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Merge pull request #421 from jeromekelleher/release-0.2.3
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Release 0.2.3
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jeromekelleher authored Nov 22, 2019
2 parents 80b2fea + a6da966 commit 842996b
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26 changes: 23 additions & 3 deletions python/CHANGELOG.rst
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--------------------
[0.2.3] - 20XX-XX-XX
[0.2.3] - 2019-11-22
--------------------

In development.
Minor feature release, providing a tree distance metric and various
method to manipulate tree sequence data.

**New features**

- Kendall-Colijn tree distance metric computed by ``Tree.kc_distance``
(:user:`awohns`, :pr:`172`).
- New "timeasc" and "timedesc" orders for tree traversals
(:user:`benjeffery`, :issue:`246`, :pr:`399`).
- Up to 2X performance improvements to tree traversals (:user:`benjeffery`,
:pr:`400`).
- Add ``trim``, ``delete_sites``, ``keep_intervals`` and ``delete_intervals``
methods to edit tree sequence data. (:user:`hyanwong`, :pr:`364`,
:pr:`372`, :pr:`377`, :pr:`390`).
- Initial online documentation for CLI (:user:`hyanwong`, :pr:`414`).
- Various documentation improvements (:user:`hyanwong`, :user:`jeromekelleher`,
:user:`petrelharp`).
- Rename the ``map_ancestors`` function to ``link_ancestors``
(:user:`hyanwong`, :user:`gtsambos`; :pr:`406`,
:issue:`262`). The original function is retained as an deprecated alias.

**Bugfixes**

- Fix height scaling issues with SVG tree drawing (:user:`jeromekelleher`,
:pr:`407`, :issue:`383`, :pr:`378`).
- Do not reuse buffers in LdCalculator (:user:`jeromekelleher`). See :pr:`397` and
:issue:`396`.


--------------------
[0.2.2] - 2019-09-01
--------------------
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2 changes: 1 addition & 1 deletion python/tskit/_version.py
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# Definitive location for the version number.
# During development, should be x.y.z.devN
tskit_version = "0.2.3.dev0"
tskit_version = "0.2.3"

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