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Added methods to sort and squash segments in the IbdFinder output. #2460

Merged
merged 7 commits into from
Sep 23, 2024
Merged

Added methods to sort and squash segments in the IbdFinder output. #2460

merged 7 commits into from
Sep 23, 2024

Commits on Sep 20, 2024

  1. Added methods to sort and squash segments in the IbdFinder output.

    @gtsambos @benjeffery
    gtsambos authored and benjeffery committed Sep 20, 2024
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  2. Modified where the min_span argument is used.

    @gtsambos @benjeffery
    gtsambos authored and benjeffery committed Sep 20, 2024
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  3. Changed tests to use squashing behaviour. 

    Made some small changes to ibd.py to ensure consistent behaviour in tests
    @gtsambos @benjeffery
    gtsambos authored and benjeffery committed Sep 20, 2024
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  4. Updated definition of naive IBD.

    @gtsambos @benjeffery
    gtsambos authored and benjeffery committed Sep 20, 2024
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  5. Rehashed squashing procedure in ibd.py for clarity

    @gtsambos @benjeffery
    gtsambos authored and benjeffery committed Sep 20, 2024
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  6. Various changes to make the merge conflict go away and the tests run … 

    …again
    @gtsambos @benjeffery
    gtsambos authored and benjeffery committed Sep 20, 2024
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Commits on Sep 23, 2024

  1. Merge branch 'main' into squash-ibd

    @mergify
    mergify[bot] authored Sep 23, 2024
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