new deps

.github/CONTRIBUTING.md

@@ -109,5 +109,5 @@ If your contribution requires a new library dependency:
 
 After submitting your pull request, GitHub will automatically run the tests
 on your changes and make sure that the updated code builds successfully.
-The checks run on Python 3.10 and 3.11, on Ubuntu and Windows. We also
+The checks run on Python 3.10, 3.11 and 3.12, on Ubuntu and Windows. We also
 use services that automatically check code style and test coverage.

.github/workflows/config.yml

@@ -19,7 +19,7 @@ jobs:
       - name: Set up pdm
         uses: pdm-project/setup-pdm@v4
         with:
-          python-version: "3.11"
+          python-version: "3.12"
           cache: true
       - name: Install dependencies
         run: pdm sync -G lint --no-default
@@ -34,7 +34,7 @@ jobs:
       - name: Set up pdm
         uses: pdm-project/setup-pdm@v4
         with:
-          python-version: "3.11"
+          python-version: "3.12"
           cache: true
       - name: Install dependencies
         run: pdm sync -G lint --no-default
@@ -49,7 +49,7 @@ jobs:
       - name: Set up pdm
         uses: pdm-project/setup-pdm@v4
         with:
-          python-version: "3.11"
+          python-version: "3.12"
           cache: true
       - name: Install dependencies
         run: pdm sync -G lint --no-default
@@ -72,7 +72,7 @@ jobs:
       - name: Set up pdm
         uses: pdm-project/setup-pdm@v4
         with:
-          python-version: "3.11"
+          python-version: "3.12"
           cache: true
       - name: Install dependencies
         run: pdm sync -G lint --no-default
@@ -87,7 +87,7 @@ jobs:
       - name: Set up Python environment
         uses: actions/setup-python@v5
         with:
-          python-version: "3.11"
+          python-version: "3.12"
       - name: Code quality analysis with CodeQL
         uses: github/codeql-action/init@v3
         with:
@@ -98,7 +98,7 @@ jobs:
     strategy:
       matrix:
         os: [ubuntu-latest, windows-latest]
-        python-version: ["3.10", "3.11"]
+        python-version: ["3.10", "3.11", "3.12"]
     steps:
       - name: Free disk space windows
         shell: bash
@@ -127,7 +127,7 @@ jobs:
           pdm run pytest -n=auto --cov=atom --cov-report=xml tests/
       - name: Upload coverage to Codecov
         uses: codecov/codecov-action@v4
-        if: ${{ matrix.os == 'ubuntu-latest' && matrix.python-version == '3.11' }}
+        if: ${{ matrix.os == 'ubuntu-latest' && matrix.python-version == '3.12' }}
         with:
           files: ./coverage.xml
 
@@ -147,7 +147,7 @@ jobs:
       - name: Set up pdm
         uses: pdm-project/setup-pdm@v4
         with:
-          python-version: "3.11"
+          python-version: "3.12"
           cache: true
       - name: Install dependencies
         run: pdm sync -G full -G test
@@ -181,7 +181,7 @@ jobs:
       - name: Set up pdm
         uses: pdm-project/setup-pdm@v4
         with:
-          python-version: "3.11"
+          python-version: "3.12"
           cache: true
       - name: Install dependencies
         run: |

.github/workflows/release.yml

@@ -12,11 +12,15 @@ jobs:
         uses: actions/checkout@v4
         with:
           fetch-depth: 0  # Fetch all commits/branches
+      - name: Set up pdm
+        uses: pdm-project/setup-pdm@v4
+        with:
+          python-version: "3.11"
+          cache: true
       - name: Install dependencies
         run: |
-          python -m pip install -U pip
-          pip install -U pdm
-          pdm install -G full -G doc
+          pdm sync -G full -G doc
+          pip install cmdstanpy==0.9.5
       - name: Update documentation
         run: |
           echo "Deploying documentation for release ATOM ${GITHUB_REF_NAME::-2}"

.gitignore

@@ -20,6 +20,7 @@ mlruns/
 
 # Static Documentation
 site/
+docs/
 
 # System-specific temporary and index files
 .DS_Store

atom/plots/predictionplot.py

@@ -2939,7 +2939,7 @@ def add_wire(x, y):
             dpi, bbox = fig.get_dpi(), d.get_bbox()
             figsize = (dpi * bbox.xmax // 4, (dpi / 2) * (bbox.ymax - bbox.ymin))
 
-        d.draw(canvas=plt.gca(), showframe=False, show=False)
+        d.draw(canvas=plt.gca(), show=False)
         plt.axis("off")
 
         BasePlot._fig.used_models.extend(models_c)

docs_sources/contributing.md

@@ -109,5 +109,5 @@ If your contribution requires a new library dependency:
 
 After submitting your pull request, GitHub will automatically run the tests
 on your changes and make sure that the updated code builds successfully.
-The checks run on Python 3.10 and 3.11, on Ubuntu and Windows. We also
+The checks run on Python 3.10, 3.11 and 3.12, on Ubuntu and Windows. We also
 use services that automatically check code style and test coverage.

docs_sources/dependencies.md

@@ -71,7 +71,7 @@ additional libraries. You can install all the optional dependencies using
 * **[ray[serve]](https://docs.ray.io/en/latest/)** (>=2.9.1)
 * **[requests](https://requests.readthedocs.io/en/latest/)** (>=2.31.0)
 * **[scikit-learn-intelex](https://github.com/intel/scikit-learn-intelex)** (>=2023.2.1)
-* **[schemdraw](https://schemdraw.readthedocs.io/en/latest/index.html)** (>=0.16)
+* **[schemdraw](https://schemdraw.readthedocs.io/en/latest/index.html)** (>=0.19)
 * **[statsforecast](https://github.com/Nixtla/statsforecast/)** (>=1.7.3)
 * **[supersmoother](https://github.com/jakevdp/supersmoother)** (>=0.4)
 * **[sweetviz](https://github.com/fbdesignpro/sweetviz)** (>=2.3.1)