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PPS 1257 request upgrade #282

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PPS 1257 request upgrade #282

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4e211ae
upgrade requests to fix security issue
thanh-nguyen-dang Aug 9, 2024
bbb427e
lock poetry
thanh-nguyen-dang Aug 9, 2024
5a9f9eb
add docker-compose installation
thanh-nguyen-dang Aug 9, 2024
d5ccc9f
change base image to standard one of CTDS
thanh-nguyen-dang Aug 9, 2024
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6 changes: 6 additions & 0 deletions .github/workflows/image_build_and_test.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -93,6 +93,12 @@ jobs:
working-directory: ../compose-etl
run: echo "{\"db_host\":\"host.docker.internal\",\"db_username\":\"postgres\",\"db_password\":\"postgres\",\"db_database\":\"metadata_db\"}" > configs/creds.json

- name: Install docker-compose
working-directory: ../compose-etl
run: |
curl -L "https://github.com/docker/compose/releases/download/1.29.2/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
chmod +x /usr/local/bin/docker-compose

- name: Replace tube branch
working-directory: ../compose-etl
run: |
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1 change: 1 addition & 0 deletions Dockerfile
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@@ -1,3 +1,4 @@
ARG AZLINUX_BASE_VERSION=master
# To check running container: docker exec -it tube /bin/bash
FROM quay.io/cdis/python:python3.9-buster-stable

Expand Down Expand Up @@ -72,7 +73,7 @@
RUN wget ${MAVEN_ES_SPARK_VERSION}-javadoc.jar -O ${ES_HADOOP_HOME_VERSION}/dist/${ES_SPARK_20_2_11}-${ES_HADOOP_VERSION}-javadoc.jar
RUN wget ${MAVEN_ES_SPARK_VERSION}-sources.jar -O ${ES_HADOOP_HOME_VERSION}/dist/${ES_SPARK_20_2_11}-${ES_HADOOP_VERSION}-sources.jar

ENV HADOOP_CONF_DIR=$HADOOP_HOME/etc/hadoop \

Check warning on line 76 in Dockerfile

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GitHub Actions / Build and push image / Build Image and Push

Variables should be defined before their use 

UndefinedVar: Usage of undefined variable '$LD_LIBRARY_PATH'
More info: https://docs.docker.com/go/dockerfile/rule/undefined-var/
HADOOP_MAPRED_HOME=$HADOOP_HOME \
HADOOP_COMMON_HOME=$HADOOP_HOME \
HADOOP_HDFS_HOME=$HADOOP_HOME \
Expand Down Expand Up @@ -110,4 +111,4 @@
#RUN chmod +x /tini
#ENTRYPOINT ["/tini", "--"]

ENV PYTHONUNBUFFERED 1

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GitHub Actions / Build and push image / Build Image and Push

Legacy key/value format with whitespace separator should not be used 

LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format
More info: https://docs.docker.com/go/dockerfile/rule/legacy-key-value-format/
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