Upgrade numpy

.github/workflows/pytest.yml

@@ -16,15 +16,22 @@ jobs:
           python-version: "3.x"
       - name: Install GMT
         run: sudo apt-get update && sudo apt-get install -y gmt libgmt-dev ghostscript
-      - name: Install dependencies
-        run: |
-          python -m pip install --upgrade pip
-          pip install -e .
+
+      - name: Define a cache dependency glob
+        uses: astral-sh/setup-uv@v5
+        with:
+          enable-cache: true
+          cache-dependency-glob: "requirements**.txt"
+
+      - name: Install the project
+        run: uv sync --all-extras --dev
+
       - name: Initialise DuckDB
-        run: python -c "import duckdb; duckdb.sql('INSTALL sqlite')"
+        run: source .venv/bin/activate && python -c "import duckdb; duckdb.sql('INSTALL sqlite')"
 
       - name: Run tests
         run: |
+          source .venv/bin/activate
           pytest --cov=nshmdb --cov-report=html tests
 
       - name: Upload coverage data

pyproject.toml

@@ -7,7 +7,7 @@ name = "nshmdb"
 authors = [{name="QuakeCoRE"}]
 description = "A library for working with 2022 NSHM fault geometry"
 readme = "README.md"
-requires-python = ">=3.7"
+requires-python = ">=3.10"
 dynamic = ["dependencies", "version"]
 
 [project.scripts]

requirements.txt

@@ -1,6 +1,6 @@
 duckdb
 geojson
-numpy<2
+numpy
 pandas
 pygmt_helper @ git+https://github.com/ucgmsim/pygmt_helper.git
 pytest