Docker image for Boutros Lab Plotting General R package that can be used in pipelines to generate publication quality plots.
Boutros Lab Plotting General here
Docker introduction here
Dockerfile Best Practices here
Docker image versioning standard here
The current image v7.1.0 is built with R v4.4.0.
| R Packages | Version | Type |
|---|---|---|
| BoutrosLab.plotting.general | 7.1.0 |
main |
| argparse | latest from CRAN |
dependency |
| pkgdepends | latest from CRAN |
dependency |
| dplyr | latest from CRAN |
optional |
| naturalsort | latest from CRAN |
optional |
| optparse | latest from CRAN |
optional |
| reshape | latest from CRAN |
optional |
The Dockerfile in this repo utilizes an R package, pkgdepends to recursively install all dependencies and BoutrosLab.plotting.general. The pkgdepends workflow is in the R script, install_bpg.
- Issue tracker to report errors and enhancement ideas.
- Discussions can take place in docker-BoutrosLabPlottingGeneral Discussions
- docker-BoutrosLabPlottingGeneral pull requests are also open for discussion
Please see list of Contributors at GitHub.
- P’ng, C., Green, J., Chong, L.C. et al. BPG: Seamless, automated and interactive visualization of scientific data. BMC Bioinformatics 20, 42 (2019). https://doi.org/10.1186/s12859-019-2610-2
Author: Mohammed Faizal Eeman Mootor
docker-BoutrosLabPlottingGeneral is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.
docker-BoutrosLabPlottingGeneral can be used to create a docker instance of the Boutros Lab Plotting General.
Copyright (C) 2023-2024 University of California Los Angeles ("Boutros Lab") All rights reserved.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.