Dockerfile for MuSE.
MuSE is a tool for fast and accurate calling of somatic point mutations from tumor-normal paired samples. MuSE uses the Markov substitution model to detect somatic mutations for whole-genome sequencing and whole-exome sequencing samples. Details can be found here.
This image can be found in docker-MuSE's GitHub package page here.
MuSE documentation is here.
| Tool | Version |
|---|---|
| MuSE | 2.0.4 |
- Fan, Y. et al. (2016) ‘MuSE: accounting for tumor heterogeneity using a sample-specific error model improves sensitivity and specificity in mutation calling from sequencing data’, Genome biology, 17(1), p. 178. doi: 10.1186/s13059-016-1029-6.
Author: Mao Tian, Sorel Fitz-Gibbon
docker-MuSE is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.
MuSE is a fast and accurate tool to detect somatic point mutations using the Markov substitution model.
Copyright (C) 2022-2023 University of California Los Angeles ("Boutros Lab") All rights reserved.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.