Dockerfile for SAMtools - a tools for "Reading/writing/editing/indexing/viewing SAM/BAM/CRAM format".
Boutros Lab Docker Hub repo: https://hub.docker.com/r/blcdsdockerregistry/samtools
SAMtools documentation here.
| Tool | Version |
|---|---|
| SAMtools | 1.20 |
- Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, and 1000 Genome Project Data Processing Subgroup, The Sequence alignment/map (SAM) format and SAMtools, Bioinformatics (2009) 25(16) 2078-9.
- Danecek P, Bonfield JK, Liddle J, Marshall J, Ohan V, Pollard MO, Whitwham A, Keane T, McCarthy SA, Davies RM, Li H, Twelve years of SAMtools and BCFtools, GigaScience (2021) 10(2).