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CEV Report #70

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CEV Report #70

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Commits on Feb 16, 2023

  1. Base CEV report Rmd

    @dan-knight
    dan-knight committed Feb 16, 2023
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  2. Basic report function

    @dan-knight
    dan-knight committed Feb 16, 2023
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  3. Update changelog

    @dan-knight
    dan-knight committed Feb 16, 2023
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  4. Update dependencies

    @dan-knight
    dan-knight committed Feb 16, 2023
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  5. Merge branch 'feature-report' into danknight-report-template

    @dan-knight
    dan-knight committed Feb 16, 2023
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  6. Merge pull request #68 from uclahs-cds/danknight-report-template 

    Basic Rmd report structure
    @whelena
    whelena committed Feb 16, 2023
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Commits on Feb 22, 2023

  1. Merge branch 'main' of github.com:uclahs-cds/public-R-CancerEvolution… 

    …Visualization into feature-report
    @dan-knight
    dan-knight committed Feb 22, 2023
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Commits on Feb 25, 2023

  1. Define report inputs

    @dan-knight
    dan-knight committed Feb 25, 2023
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Commits on Feb 27, 2023

  1. Validate input column exist

    @dan-knight
    dan-knight committed Feb 27, 2023
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  2. Wrapper report data prep function

    @dan-knight
    dan-knight committed Feb 27, 2023
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Commits on Mar 3, 2023

  1. Column validation unit tests

    @dan-knight
    dan-knight committed Mar 3, 2023
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Commits on Mar 27, 2023

  1. Heatmap default colours

    @dan-knight
    dan-knight committed Mar 27, 2023
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  2. Move heatmap functions

    @dan-knight
    dan-knight committed Mar 27, 2023
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Commits on Mar 29, 2023

  1. Refactor summary heatmap 

    - Tweaked plot parameters
- Refactored inputs/aggregate functionality for clearer use
    @dan-knight
    dan-knight committed Mar 29, 2023
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Commits on Mar 30, 2023

  1. Tests and test data for heatmap functions

    @dan-knight
    dan-knight committed Mar 30, 2023
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  2. Suppress three-colour warning in create.heatmap

    @dan-knight
    dan-knight committed Mar 30, 2023
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  3. Fix linting errors

    @dan-knight
    dan-knight committed Mar 30, 2023
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  4. Update function imports

    @dan-knight
    dan-knight committed Mar 30, 2023
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  5. Update changelog

    @dan-knight
    dan-knight committed Mar 30, 2023
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  6. Update heatmap argument names

    @dan-knight
    dan-knight committed Mar 30, 2023
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Commits on Apr 5, 2023

  1. Merge branch 'danknight-refactor-heatmaps' of github.com:uclahs-cds/p… 

    …ublic-R-CancerEvolutionVisualization into feature-report
    @dan-knight
    dan-knight committed Apr 5, 2023
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  2. Validate clone IDs in report input

    @dan-knight
    dan-knight committed Apr 5, 2023
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  3. Fix DESCRIPTION

    @dan-knight
    dan-knight committed Apr 5, 2023
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  4. Column validation unit tests

    @dan-knight
    dan-knight committed Apr 5, 2023
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  5. Prep report plot data

    @dan-knight
    dan-knight committed Apr 5, 2023
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  6. Tests for report plot data

    @dan-knight
    dan-knight committed Apr 5, 2023
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  7. Fix code style

    @dan-knight
    dan-knight committed Apr 5, 2023
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  8. Fix report column names

    @dan-knight
    dan-knight committed Apr 5, 2023
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  9. Add plots to CEV report Rmarkdown template

    @dan-knight
    dan-knight committed Apr 5, 2023
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  10. Update changelog

    @dan-knight
    dan-knight committed Apr 5, 2023
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  11. Fix report template filepath

    @dan-knight
    dan-knight committed Apr 5, 2023
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Commits on Apr 6, 2023

  1. Fix test data

    @dan-knight
    dan-knight committed Apr 6, 2023
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Commits on Apr 11, 2023

  1. option to save heatmaps by specifying filename

    @whelena
    whelena committed Apr 11, 2023
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  2. rename CCF.df to CCF.arr for clarity

    @whelena
    whelena committed Apr 11, 2023
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Commits on Dec 15, 2023

  1. Merge branch 'main' of github.com:uclahs-cds/package-CancerEvolutionV… 

    …isualization into feature-report
    @dan-knight
    dan-knight committed Dec 15, 2023
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