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doc (moPepGen): version bump to 1.2.0
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zhuchcn committed Aug 2, 2023
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28 changes: 13 additions & 15 deletions CHANGELOG.md
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Expand Up @@ -10,7 +10,19 @@ This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.htm

## [Unreleased]

## [1.2.1] - 2023-07-14
## [1.2.0] - 2023-08-03

### Fixed

- Fixed that reference source are not recognized. Switched to use upper case values. #758

- Fixed `generateIndex` that symlink was not created properly for GTF with `--gtf-symlink`.

- Fixed matplotlib warning message #742

- Fixed `parseVEP` that insertions not parsed successfully if the location is a single base. #766

- Fixed `callVariant` that peptides with upstream cleavage altering mutations were not called. #670

- Fixed fuzzTest to take multiple CPUs and use temporary directory.

Expand All @@ -26,20 +38,6 @@ This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.htm

- Fixed callVariant that `fit_into_codon` terminated early in fusion transcripts when there donor has a frameshift and accepter has a variant right after the breakpoint. #786

## [1.2.0] - 2023-07-04

### Fixed

- Fixed that reference source are not recognized. Switched to use upper case values. #758

- Fixed `generateIndex` that symlink was not created properly for GTF with `--gtf-symlink`.

- Fixed matplotlib warning message #742

- Fixed `parseVEP` that insertions not parsed successfully if the location is a single base. #766

- Fixed `callVariant` that peptides with upstream cleavage altering mutations were not called. #670

## [1.1.0] - 2023-06-28

### Fixed
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2 changes: 1 addition & 1 deletion moPepGen/__init__.py
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from typing import Iterable, IO


__version__ = '1.2.1'
__version__ = '1.2.0'

## Error messages
ERROR_INDEX_IN_INTRON = 'The genomic index seems to be in an intron'
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