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Merge pull request #162 from uclahs-cds/jieunoh-update-to-ver-7.3.1
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Update version in CHANGELOG.md and methods.config to 7.3.1
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graceooh authored Jan 14, 2022
2 parents 1304401 + d8fe5e0 commit fa3c0a6
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4 changes: 3 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -8,9 +8,11 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/).
This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [Unreleased]

## [7.3.1] - 2022-01-14
### Changed
- Update GATK to 4.2.4.1 to address Log4j vulnerabilities (https://github.com/advisories/GHSA-8489-44mv-ggj8, https://github.com/advisories/GHSA-p6xc-xr62-6r2g)
- Update Picard version to 2.26.10 to address Log4j moderate vulnerability (https://github.com/advisories/GHSA-8489-44mv-ggj8)
- Update Picard version to 2.26.10 to address Log4j vulnerabilities (https://github.com/advisories/GHSA-8489-44mv-ggj8)

### Added
- Add F32 config file
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2 changes: 1 addition & 1 deletion metadata.yaml
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Expand Up @@ -6,6 +6,6 @@ Contributors: ["Benjamin Carlin", "Chenghao Zhu", "Aaron Holmes", "Takafumi Yama
Languages: ["Nextflow", "Docker"]
Dependencies: ["Java", "Nextflow", "Docker"]
References: "https://uclahs.box.com/s/qfzr99sc8ntmfddn30ii62wx4273utoz"
Tools: ["BWA-MEM2 2.2.1", "HISAT2 2.2.1", "SAMTools 1.12", "Picard Tools 2.23.3"]
Tools: ["BWA-MEM2 2.2.1", "HISAT2 2.2.1", "SAMTools 1.12", "Picard Tools 2.26.10"]
Engineering_Owner: "Aaron Holmes"
Scientific_Owner: "Takafumi Yamaguchi"
2 changes: 1 addition & 1 deletion pipeline/config/methods.config
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Expand Up @@ -5,7 +5,7 @@ manifest {
name = "align-DNA"
author = "Benjamin Carlin; Chenghao Zhu; Aaron Holmes; Yash Patel; Nicole Zeltser; Jieun Oh"
description = "alignment pipeline for paired fastqs DNA samples"
version = "7.3.0"
version = "7.3.1"
}

params {
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