align-DNA v10.0.0-rc.1

What's Changed

• rename base_output_dir to output_dir_base by @jarbet in #250
• setup nftest a-mini-n2 by @jarbet in #254
• Update picard to v3.0.0 by @bethneilsen in #265
• Update resource handling by @yashpatel6 in #266
• Add alt-aware parameter by @yashpatel6 in #268
• Update SAMTools to v1.17 by @bethneilsen in #270
• Add Support for YAML Input by @ehg11 in #269
• Using pipeline-Nextflow-module's PipeVal Module by @ehg11 in #271
• Update README.md by @j2salmingo in #273
• jsalmingo-add parameter validation by @j2salmingo in #277
• Add plantuml gh action by @j2salmingo in #275
• Autofix broken Confluence links by @nwiltsie in #280
• Enable dependabot to keep submodules up-to-date by @nwiltsie in #282
• Fix tests by @yashpatel6 in #286
• Bump external/nextflow-modules from 4bc4336 to b0b2798 by @dependabot in #283
• Bump external/nextflow-config from c77aeca to 1960eaa by @dependabot in #284
• Remove duplicated methods by @nwiltsie in #288
• Bump external/nextflow-modules from b0b2798 to 9db08f0 by @dependabot in #289
• Bump external/nextflow-config from 1960eaa to da8e990 by @dependabot in #290
• Release v10.0.0-rc.1 by @yashpatel6 in #291

New Contributors

• @bethneilsen made their first contribution in #265
• @ehg11 made their first contribution in #269
• @j2salmingo made their first contribution in #273
• @nwiltsie made their first contribution in #280
• @dependabot made their first contribution in #283

Full Changelog: v9.0.0...v10.0.0-rc.1