recalibrate-BAM v1.0.0-rc.1
[Added]
- Basic configuration setup
- Input YAML templates and handling
- Per-patient input YAML handling
- Interval splitting process, either per-chromosome by default or scattered
- Indel Realignment workflow
- BQSR workflow
- Merging workflow
- Contamination and depth of coverage processes
- Input deletion
- Intermediate file deletion
- Schema validation
- Documentation