Extract version from runtime

uclahs-cds · Mar 1, 2024 · 6b7d079 · 6b7d079
1 parent 24202d3
commit 6b7d079
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diff --git a/run-nextflow-tests/betterconfig.groovy b/run-nextflow-tests/betterconfig.groovy
@@ -5,6 +5,7 @@ import groovy.lang.Closure
 import groovy.lang.ProxyMetaClass
 import groovy.util.ConfigObject
 
+import nextflow.Const
 import nextflow.cli.CliOptions
 import nextflow.cli.CmdRun
 import nextflow.config.ConfigBuilder
@@ -210,6 +211,8 @@ void print_configuration() {
         walk(interceptor, "process", config.process)
     }
 
+    System.out.println("betterconfig_nextflow_version=${Const.APP_VER}")
+
     System.out << ConfigHelper.toPropertiesString(config, false)
 }
 

diff --git a/run-nextflow-tests/configtest.py b/run-nextflow-tests/configtest.py
@@ -59,8 +59,11 @@ def from_file(cls: Type[T], pipeline: Path, filepath: Path) -> T:
 
     def replace_results(self: T, updated_results) -> T:
         "Return another test object with updated results and filepath."
+        nf_version = updated_results.pop("betterconfig_nextflow_version")
+
         regenerated_test = dataclasses.replace(
             self,
+            nextflow_version=nf_version,
             expected_result=updated_results
         )