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CLI suite for creating/validating genomics datasets

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genocrate

PyPI Changelog Tests License

CLI suite

Installation

Install this tool using pip:

pip install genocrate

Usage

For help, run:

genocrate --help

You can also use:

python -m genocrate --help

Development

To contribute to this tool, first checkout the code. Then create a new virtual environment:

uv venv
source .venv/bin/activate

Now install the dependencies and test dependencies:

pip install -e '.[test]'

To run the tests:

python -m pytest

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CLI suite for creating/validating genomics datasets

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