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Bug fix for jobs with multiple grids in the same file. #117

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Bug fix for jobs with multiple grids in the same file. #117

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ec80d4e
Fix for andrews
ledm Nov 14, 2023
f06826e
An offering of sacrificial comment lines to appease @valeriupredoi.
ledm Nov 15, 2023
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16 changes: 13 additions & 3 deletions bgcval2/functions/globalVolMean.py
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Original file line number Diff line number Diff line change
Expand Up @@ -31,18 +31,28 @@

import numpy as np
from bgcval2.functions.standard_functions import choose_best_var
from bgcval2.functions.standard_functions import find_best_var

#def calc_vol(nc):
# """
# Calculate volume from the (grid-T) netcdf file.
# """
# area = nc.variables['area'][:]
# thkcello = nc.variables['thkcello'][:]
# area = area[None, None,:, :]
# return thkcello * area
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def calc_vol(nc):
"""
Calculate volume from the (grid-T) netcdf file.
"""
area = nc.variables['area'][:]
thkcello = nc.variables['thkcello'][:]
area_key = find_best_var(nc, ['area', 'area_grid_T'])
thkcello_key = find_best_var(nc, ['thkcello', 'thkcello_grid_T'])
area = nc.variables[area_key][:]
thkcello = nc.variables[thkcello_key][:]
area = area[None, None,:, :]
return thkcello * area


def globalVolumeMean(nc, keys, **kwargs):
"""
Calculate the global volume mean.
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