all data moved to example_data

ventolab · Jul 7, 2024 · e5d25ad · e5d25ad
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diff --git a/..._method3_CellSign_microenvironments.ipynb → ..._method3_CellSign_microenvironments.ipynb b/..._method3_CellSign_microenvironments.ipynb → ..._method3_CellSign_microenvironments.ipynb
diff --git a/...es/CaseExample1_differentiation/input.zip → ...es/CaseExample1_differentiation/input.zip b/...es/CaseExample1_differentiation/input.zip → ...es/CaseExample1_differentiation/input.zip
diff --git a/.../analysis_method3_microenvironments.ipynb → .../analysis_method3_microenvironments.ipynb b/.../analysis_method3_microenvironments.ipynb → .../analysis_method3_microenvironments.ipynb
diff --git a/...dies/CaseExample2_spatialNiches/input.zip → ...dies/CaseExample2_spatialNiches/input.zip b/...dies/CaseExample2_spatialNiches/input.zip → ...dies/CaseExample2_spatialNiches/input.zip
diff --git a/...ityScoring/analysis_method2_scoring.ipynb → ...ityScoring/analysis_method2_scoring.ipynb b/...ityScoring/analysis_method2_scoring.ipynb → ...ityScoring/analysis_method2_scoring.ipynb
diff --git a/...CaseExample3_specificityScoring/input.zip → ...CaseExample3_specificityScoring/input.zip b/...CaseExample3_specificityScoring/input.zip → ...CaseExample3_specificityScoring/input.zip
diff --git a/...cols2024_case_studies/T0_DownloadDB.ipynb → ...cols2024_case_studies/T0_DownloadDB.ipynb b/...cols2024_case_studies/T0_DownloadDB.ipynb → ...cols2024_case_studies/T0_DownloadDB.ipynb
diff --git a/...s2024_case_studies/v5.0.0/cellphonedb.zip → ...s2024_case_studies/v5.0.0/cellphonedb.zip b/...s2024_case_studies/v5.0.0/cellphonedb.zip → ...s2024_case_studies/v5.0.0/cellphonedb.zip
diff --git a/...024_case_studies/v5.0.0/complex_input.csv → ...024_case_studies/v5.0.0/complex_input.csv b/...024_case_studies/v5.0.0/complex_input.csv → ...024_case_studies/v5.0.0/complex_input.csv
diff --git a/...ls2024_case_studies/v5.0.0/gene_input.csv → ...ls2024_case_studies/v5.0.0/gene_input.csv b/...ls2024_case_studies/v5.0.0/gene_input.csv → ...ls2024_case_studies/v5.0.0/gene_input.csv
diff --git a/...case_studies/v5.0.0/interaction_input.csv → ...case_studies/v5.0.0/interaction_input.csv b/...case_studies/v5.0.0/interaction_input.csv → ...case_studies/v5.0.0/interaction_input.csv
diff --git a/...024_case_studies/v5.0.0/protein_input.csv → ...024_case_studies/v5.0.0/protein_input.csv b/...024_case_studies/v5.0.0/protein_input.csv → ...024_case_studies/v5.0.0/protein_input.csv
diff --git a/....0/sources/transcription_factor_input.csv → ....0/sources/transcription_factor_input.csv b/....0/sources/transcription_factor_input.csv → ....0/sources/transcription_factor_input.csv
diff --git a/...udies/v5.0.0/sources/uniprot_synonyms.tsv → ...udies/v5.0.0/sources/uniprot_synonyms.tsv b/...udies/v5.0.0/sources/uniprot_synonyms.tsv → ...udies/v5.0.0/sources/uniprot_synonyms.tsv