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[WIP] Enhance distance and gpf metrics #161

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[WIP] Enhance distance and gpf metrics #161

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Commits on Feb 16, 2024

  1. Add dev notebook to test stuff

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  2. Change distance and gfp metrics

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Commits on Feb 19, 2024

  1. change correlation and gfp

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  3. Update _checks.py

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  4. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  5. wip

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  7. fix _correlation

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Commits on Feb 20, 2024

  1. Use pairwise_distances + cosine

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  2. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  4. wip

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  5. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  7. Update _base.py

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  8. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  9. wip

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  11. Update extract_gfp_peaks.py

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  12. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  13. wip

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  15. Update _base.py

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  16. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  18. wip

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  19. Update _checks.py

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  20. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  22. Merge branch 'main' into dev-meeg

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  23. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  24. fix some tests

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  26. Update utils.py

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  28. Update utils.py

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  30. wip

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  31. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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Commits on Feb 21, 2024

  1. wip

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  2. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  4. wip

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  6. remove prints

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  7. Fix tests

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  8. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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  10. Update _base.py

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  11. Update _base.py

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Commits on Apr 5, 2024

  1. Update _base.py

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Commits on Apr 15, 2024

  1. wip ignore polarity

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  2. fix arguments

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    vferat committed Apr 15, 2024
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  3. Update kmeans.py

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  4. Merge branch 'main' into dev-meeg

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  6. fix imports

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  9. save ingore polarity parameter

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  10. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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Commits on Apr 16, 2024

  1. Squashed commit of the following: 

    commit 4962016c029a482ea662726c2fd33ac446d3433c
Merge: 8bf3cad e486a2c
Author: vferat <[email protected]>
Date:   Tue Apr 16 19:27:30 2024 +0200

    Merge branch 'main' into dev_meeg-16042024
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  3. wip save

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  4. Merge branch 'dev-meeg' of https://github.com/vferat/pycrostates into… 

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Commits on Apr 17, 2024

  1. Fix kmeans

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