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Test and document Santu Tikka's causaleffect R package #8

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Test and document Santu Tikka's causaleffect R package #8

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Commits on Jul 11, 2024

  1. Added testthat

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    hmhummel committed Jul 11, 2024
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Commits on Jul 15, 2024

  1. Added documentation to simplify.R and made progress on test cases & u… 

    …nit tests on test-simplify.R
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    hmhummel committed Jul 15, 2024
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Commits on Jul 18, 2024

  1. Documented simplify.R, made progress on test-simplify unit test for 3… 

    … test cases
    @hmhummel
    hmhummel committed Jul 18, 2024
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Commits on Jul 22, 2024

  1. Update causal.effect.R

    @djinnome
    djinnome authored Jul 22, 2024
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  2. Documented/annotated the following functions: join, simplify, powerset.

    @hmhummel
    hmhummel committed Jul 22, 2024
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  3. Started documenting/annotating causal.effect

    @hmhummel
    hmhummel committed Jul 22, 2024
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Commits on Jul 23, 2024

  1. Continuing to work on test case #2 unit tests for parse.expression & … 

    …simplify
    @hmhummel
    hmhummel committed Jul 23, 2024
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Commits on Jul 25, 2024

  1. Was able to get parse.expression unit test for test case #2 to pass!

    @hmhummel
    hmhummel committed Jul 25, 2024
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  2. Unit tests for parse.expression and simplify for test case #2 now pass!

    @hmhummel
    hmhummel committed Jul 25, 2024
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  3. Added 2 unit tests for test case #2 with causal.effect simp = TRUE

    @hmhummel
    hmhummel committed Jul 25, 2024
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Commits on Jul 26, 2024

  1. Separated 3 test cases' unit tests into 3 separate files

    @hmhummel
    hmhummel committed Jul 26, 2024
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  2. Rename test-simplify.R to all_3_test_cases.R 

    This file contains all 3 test cases compiled into 1 file.
    @hmhummel
    hmhummel authored Jul 26, 2024
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  3. Formatted all 3 test cases and worked on test case #2 parse.expressio… 

    …n unit test with causal.effect simp = TRUE
    @hmhummel
    hmhummel committed Jul 26, 2024
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  4. Update test_case_1.R

    @hmhummel
    hmhummel authored Jul 26, 2024
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  5. Update test_case_2.R

    @hmhummel
    hmhummel authored Jul 26, 2024
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  6. Update test_case_3.R

    @hmhummel
    hmhummel authored Jul 26, 2024
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  7. Concluded merge and renamed test-simplify.R to all_3_test_cases.R

    @hmhummel
    hmhummel committed Jul 26, 2024
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  8. Resolved merge conflict in test_case_2.R

    @hmhummel
    hmhummel committed Jul 26, 2024
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  9. Completed test case files. All 17 total unit tests now pass.

    @hmhummel
    hmhummel committed Jul 26, 2024
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  10. Updated to completed version of test cases, where all 17 unit tests pass

    @hmhummel
    hmhummel committed Jul 26, 2024
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Commits on Jul 27, 2024

  1. created R documentation file for the function simplify(), and comment… 

    …ed out the simplify.R function file
    @hmhummel
    hmhummel committed Jul 27, 2024
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Commits on Jul 30, 2024

  1. Added roxygen line to DESCRIPTION, began to create documentation for … 

    …simplify.R
    @hmhummel
    hmhummel committed Jul 30, 2024
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  2. Delete man/simplify.Rd 

    delete previously-created simplify .Rd documentation in order to ensure no conflict with roxygen-created simplify (cannot modify .Rd files by hand; must use roxygen)
    @hmhummel
    hmhummel authored Jul 30, 2024
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Commits on Jul 31, 2024

  1. Updated DESCRIPTION file to include Roxygen: list(markdown = TRUE) an… 

    …d Encoding = UTF-8. Updated NAMESPACE file to include export(simplify). Updated simplify.R to include working documentation when ?simplify is run.
    @hmhummel
    hmhummel committed Jul 31, 2024
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  2. Adding .Rd documentation file for simplify function to man

    @hmhummel
    hmhummel committed Jul 31, 2024
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  3. Created working documentation for join.R using roxygen2, and updated … 

    …simplify.Rd documentation. Added export(join) to NAMESPACE.
    @hmhummel
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  4. Started documenting insert function, worked on documentation for join… 

    … and simplify.
    @hmhummel
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Commits on Aug 2, 2024

  1. Added a unit test for join() to vignette #1, and updated join() funct… 

    …ion documentation files with the test example.
    @hmhummel
    hmhummel committed Aug 2, 2024
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Commits on Aug 5, 2024

  1. Changed documentation for simplify - observed.graph and unobserved.gr… 

    …aph are causaleffect functions, not igraph.
    @hmhummel
    hmhummel committed Aug 5, 2024
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  2. Updated simplify documentation further regarding the G.unobs, G, and … 

    …G.obs functions
    @hmhummel
    hmhummel committed Aug 5, 2024
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Commits on Aug 6, 2024

  1. Completed documentation of insert.R and created insert.Rd documentati… 

    …on file. Added an insert unit test to test case 1.
    @hmhummel
    hmhummel committed Aug 6, 2024
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  2. Fixed typo in insert documentation

    @hmhummel
    hmhummel committed Aug 6, 2024
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  3. Fixed typo in test case #1

    @hmhummel
    hmhummel committed Aug 6, 2024
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  4. Added join unit test (from causal.effect with simp = FALSE) to test c… 

    …ase #3, fixed typo in test case #1
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Commits on Aug 7, 2024

  1. Updated test case 3 with 2 new unit tests for join from simp = FALSE … 

    …and simp = TRUE
    @hmhummel
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  2. Created join and insert unit tests for test cases #1 and #3. Made for… 

    …matting changes to test case #2. Updated all_3_test_cases document to reflect changes. Began documenting powerset.R
    @hmhummel
    hmhummel committed Aug 7, 2024
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Commits on Aug 13, 2024

  1. Created documentation for powerset function

    @hmhummel
    hmhummel committed Aug 13, 2024
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Commits on Aug 16, 2024

  1. Clarified documentation for simplify, join and insert (added dependen… 

    …cies sections)
    @hmhummel
    hmhummel committed Aug 16, 2024
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  2. Clarified that unit test for insert in test case 1 passes. Attempted … 

    …to fix unit tests for join and insert but did not succeed.
    @hmhummel
    hmhummel committed Aug 16, 2024
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Commits on Aug 20, 2024

  1. Added simplify with breakpoints used to create join and insert unit t… 

    …ests for reproducibility
    @hmhummel
    hmhummel committed Aug 20, 2024
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Commits on Aug 23, 2024

  1. Added documentation for parse.expression function. The simplify.Rd an… 

    …d join.Rd files can now link to parse.expression as well.
    @hmhummel
    hmhummel committed Aug 23, 2024
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  2. Updated compiled file of all 3 test cases with 25 total unit tests. 2… 

    …3/25 unit tests pass.
    @hmhummel
    hmhummel committed Aug 23, 2024
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