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Can I use genome-aligned BAM file as input to TQSLE? #2

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yswutan opened this issue Jul 12, 2024 · 1 comment
Open

Can I use genome-aligned BAM file as input to TQSLE? #2

yswutan opened this issue Jul 12, 2024 · 1 comment

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@yswutan
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yswutan commented Jul 12, 2024

I would like to use TQSLE for transcript quantification, but I only have the bam files from STAR, is there any possible for me to perform the analysis? Thanks.
@yhg926
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yhg926 commented Nov 14, 2024

Currently, TQSLE only support fastq file as input, may be you can extract fastq from bam?

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@yhg926 @yswutan