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1. DeepGlyco DeepGlyco Public

   Prediction of glycopeptide fragment mass spectra by deep learning

   Python 7 2

2. lmsac/GproDIA lmsac/GproDIA Public

   Data-independent acquisition glycoproteomics with comprehensive statistical control.

   Python 2

3. lmsac/DeepDIA lmsac/DeepDIA Public

   Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.

   Python 41 16

4. lmsac/DeepMS2-phospho lmsac/DeepMS2-phospho Public

   Generate in silico spectral libraries of phosphopeptides and performing spectral matching for phosphorylation site localization.

   R 2 2

5. lmsac/metaproteomics-utilities lmsac/metaproteomics-utilities Public

   Scripts for metaproteomics data analysis and visualization.

   R