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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 19

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    35 46

Repositories

Showing 10 of 427 repositories
  • ixa-epi-isolation Public
    CDCgov/ixa-epi-isolation’s past year of commit activity
    Rust 1 Apache-2.0 2 5 7 Updated Feb 8, 2025
  • clean-genes Public

    A rust crate that automatically cleans up a gene alignment by trimming to ORF and identifying and/or removing problematic sequences.

    CDCgov/clean-genes’s past year of commit activity
    Rust 1 Apache-2.0 2 4 0 Updated Feb 8, 2025
  • NEDSS-Modernization Public
    CDCgov/NEDSS-Modernization’s past year of commit activity
    Java 19 4 0 4 Updated Feb 8, 2025
  • prime-simplereport Public

    SimpleReport is a fast, free, and easy way for COVID-19 testing facilities to report results to public health departments.

    CDCgov/prime-simplereport’s past year of commit activity
    Java 60 CC0-1.0 60 197 17 Updated Feb 8, 2025
  • RecordLinker Public

    The RecordLinker is a service that links records from two datasets based on a set of common attributes. The service is designed to be used in a variety of public health contexts, such as linking patient records from different sources or linking records from different public health surveillance systems.

    CDCgov/RecordLinker’s past year of commit activity
    Python 3 Apache-2.0 2 25 3 Updated Feb 8, 2025
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 65 Apache-2.0 24 15 1 Updated Feb 8, 2025
  • DynODE Public

    CDC/CFA/Predict/Scenarios ODE Modeling Framework

    CDCgov/DynODE’s past year of commit activity
    Python 7 Apache-2.0 2 46 (3 issues need help) 2 Updated Feb 7, 2025
  • dibbs-ecr-viewer Public
    CDCgov/dibbs-ecr-viewer’s past year of commit activity
    HTML 1 CC0-1.0 0 246 6 Updated Feb 8, 2025
  • pyrenew-hew Public

    Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 7 Apache-2.0 3 58 7 Updated Feb 8, 2025
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    Kotlin 76 CC0-1.0 42 1,264 155 Updated Feb 8, 2025
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