Skip to content
@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

Pinned Loading

  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 14

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    32 39

Repositories

Showing 10 of 409 repositories
  • phoenix Public

    🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 59 Apache-2.0 18 9 2 Updated Dec 1, 2024
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 1 0 0 Updated Nov 30, 2024
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 2 0 0 Updated Nov 30, 2024
  • ww-inference-model Public

    An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case count data to produce nowcasts and forecasts of both observations

    CDCgov/ww-inference-model’s past year of commit activity
    R 19 Apache-2.0 2 74 (3 issues need help) 4 Updated Nov 30, 2024
  • trusted-intermediary Public

    Bringing together healthcare providers by reducing the connection burden.

    CDCgov/trusted-intermediary’s past year of commit activity
    Groovy 11 Apache-2.0 5 162 7 Updated Nov 30, 2024
  • covid19-forecast-hub Public

    A repository run by the US CDC to collect forecast data for the weekly new COVID-19 hospitalizations.

    CDCgov/covid19-forecast-hub’s past year of commit activity
    R 6 Apache-2.0 9 5 2 Updated Nov 30, 2024
  • nis-py-api Public

    Python API to NIS data

    CDCgov/nis-py-api’s past year of commit activity
    Python 2 Apache-2.0 0 9 1 Updated Nov 30, 2024
  • ixa Public
    CDCgov/ixa’s past year of commit activity
    Rust 10 Apache-2.0 0 17 3 Updated Nov 30, 2024
  • Rt-without-renewal Public
    CDCgov/Rt-without-renewal’s past year of commit activity
    Julia 21 Apache-2.0 3 70 (3 issues need help) 4 Updated Nov 30, 2024
  • ixa-epi-isolation Public
    CDCgov/ixa-epi-isolation’s past year of commit activity
    Rust 0 Apache-2.0 0 0 5 Updated Nov 29, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…