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Update with master #425

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d9cf509
Tweak some css for long axis names on the frame selector
manthey Apr 30, 2024
fe41e3a
Merge pull request #384 from DigitalSlideArchive/frame-selection-css
manthey Apr 30, 2024
00a082b
Add a setting to adjust the login message.
manthey May 14, 2024
a8751a6
Merge pull request #385 from DigitalSlideArchive/login-text
manthey May 14, 2024
f880fde
Don't show the context menu when finishing an annotation.
manthey May 20, 2024
2759a9a
Merge pull request #386 from DigitalSlideArchive/inappropriate-context
manthey May 20, 2024
337ab60
Harden drawing annotations.
manthey May 23, 2024
7c51a6f
Merge pull request #387 from DigitalSlideArchive/harden-annotations
manthey May 23, 2024
c1307bf
Update README
manthey May 24, 2024
741de4b
Merge pull request #388 from DigitalSlideArchive/update-readme
manthey May 24, 2024
7260a0f
Add an admin endpoint for querying files.
manthey May 24, 2024
0dd7132
Merge pull request #389 from DigitalSlideArchive/file-query
manthey May 24, 2024
0992fab
Harden switching annotation modes
manthey May 24, 2024
dd2d4fb
Merge pull request #390 from DigitalSlideArchive/harden-annotation-modes
manthey May 24, 2024
ead7e61
Harden switching in and out of shape edit mode
manthey May 24, 2024
b88fa41
Adjusting z-index of region control dropdown
gabrielle6249 Jun 13, 2024
d02237b
Merge pull request #391 from DigitalSlideArchive/region-control-z-level
manthey Jun 20, 2024
dcb8f46
Show a loading spinner until the image is ready.
manthey Jun 26, 2024
d751fc2
Merge pull request #392 from DigitalSlideArchive/image-loading-spinner
manthey Jun 26, 2024
169fd98
Update ruff commands
manthey Jun 27, 2024
4f04b1d
Merge pull request #393 from DigitalSlideArchive/ruff-check
manthey Jun 27, 2024
35f23d0
Use new plottable data endpoints from large_image
manthey Jun 17, 2024
4b297fb
Merge pull request #394 from DigitalSlideArchive/plottable-data
manthey Jul 10, 2024
d34350c
Fix plottable data tests
manthey Jul 11, 2024
866b785
Merge pull request #395 from DigitalSlideArchive/fix-tests
manthey Jul 11, 2024
ae68e2e
Increase size of loading spinner
manthey Jul 11, 2024
3503bc6
Merge pull request #396 from DigitalSlideArchive/larger-loading-spinner
manthey Jul 11, 2024
e5d8c7f
Fix an issue with the distinct plottable list color
manthey Jul 12, 2024
4c3d0ec
Merge pull request #397 from DigitalSlideArchive/plottable-data
manthey Jul 12, 2024
277695d
Have the plot automatically respond to toggling annotation visibility
manthey Jul 12, 2024
e95b492
Merge pull request #398 from DigitalSlideArchive/plottable-data
manthey Jul 15, 2024
3adb71a
Harden annotation refreshes with plottable data
manthey Jul 17, 2024
a955e1c
Merge pull request #399 from DigitalSlideArchive/plottable-data
manthey Jul 17, 2024
3956c34
Improve plots
manthey Jul 17, 2024
5a1287e
Merge pull request #400 from DigitalSlideArchive/plottable-data
manthey Jul 19, 2024
d8eb9ce
Update plotly and how selections are handled.
manthey Jul 23, 2024
bb9cb0f
Merge pull request #403 from DigitalSlideArchive/update-plotly
manthey Jul 24, 2024
929b8ee
Don't reload plot data if it hasn't changed
manthey Jul 24, 2024
7c19cb7
Merge pull request #404 from DigitalSlideArchive/limit-reload
manthey Jul 24, 2024
a20cc2a
Update plottable data to match changes in large_image.
manthey Jul 25, 2024
ecad238
Merge pull request #405 from DigitalSlideArchive/update-plottable
manthey Jul 25, 2024
ab744d2
Reduce console warning on plot hover
manthey Jul 26, 2024
ab00745
Merge pull request #406 from DigitalSlideArchive/plot-onhover
manthey Jul 26, 2024
55de3fe
Don't show decimal places on integers
manthey Aug 1, 2024
cc268ba
Merge pull request #407 from DigitalSlideArchive/plot-number-format
manthey Aug 1, 2024
6b041c2
Limit length of text in hover info on plots
manthey Aug 13, 2024
31e698b
Merge pull request #408 from DigitalSlideArchive/plottable-hover-length
manthey Aug 13, 2024
f62c39c
Don't try to render hover images that don't exist
manthey Aug 14, 2024
6be7b0b
Merge pull request #410 from DigitalSlideArchive/fix-hover
manthey Aug 15, 2024
ebb0dc8
Better handle long analyses menu
manthey Aug 15, 2024
31cb583
Merge pull request #411 from DigitalSlideArchive/long-analyses-menus
manthey Aug 15, 2024
d5c92b6
Better handle long analyses menu
manthey Aug 16, 2024
5c7aed0
Merge pull request #412 from DigitalSlideArchive/long-analyses-menus
manthey Aug 16, 2024
f162be8
Fix a typo in the README
manthey Aug 26, 2024
c2b71df
Merge pull request #414 from DigitalSlideArchive/update-readme
manthey Aug 26, 2024
7521e05
Adjust dialog spacing
manthey Sep 3, 2024
9a54f12
Merge pull request #415 from DigitalSlideArchive/dialog-spacing
manthey Sep 3, 2024
bb2154f
Add dimension reduction options to the plot
manthey Sep 9, 2024
670a0b2
Merge pull request #416 from DigitalSlideArchive/dimension-reduction
manthey Sep 10, 2024
664d2b1
Adjust CI
manthey Sep 11, 2024
5ad8351
Merge pull request #417 from DigitalSlideArchive/adjust-ci
manthey Sep 11, 2024
5843c37
Improve plot dialog and options
manthey Sep 18, 2024
092eaf1
Merge pull request #418 from DigitalSlideArchive/plot-options
manthey Sep 19, 2024
1e71a6d
Call plot endpoint less
manthey Sep 19, 2024
a94b140
Merge pull request #419 from DigitalSlideArchive/plot-options
manthey Sep 19, 2024
14c4ead
Update ruff config file. Fix a typo.
manthey Sep 20, 2024
936c90c
Merge pull request #420 from DigitalSlideArchive/minor-updates
manthey Sep 20, 2024
f5705d7
Use session information to be more response to plottable data
manthey Sep 20, 2024
b5d2e29
Merge pull request #421 from DigitalSlideArchive/cancel-plot
manthey Sep 20, 2024
a63ac84
Fix maximizing the plot.
manthey Sep 23, 2024
fb10582
Merge pull request #422 from DigitalSlideArchive/plottable
manthey Sep 23, 2024
c0c27b7
Fix a check if we can group by two different values for violin plots
manthey Oct 4, 2024
60b75e9
Merge pull request #423 from DigitalSlideArchive/fix-plot-check
manthey Oct 4, 2024
f0d2a51
Fix a condition where the plottable data promise could be null
manthey Oct 4, 2024
64ff9fc
Merge pull request #424 from DigitalSlideArchive/fix-plottable-data-p…
manthey Oct 4, 2024
ee7013a
Fix a test based on a change in the large_image client
manthey Oct 11, 2024
81aaa8f
Merge pull request #426 from DigitalSlideArchive/fix-ci
manthey Oct 14, 2024
a1abee9
Guard resource path lookups
manthey Oct 17, 2024
3f37985
Merge pull request #427 from DigitalSlideArchive/guard-resource-paths
manthey Oct 17, 2024
8ad50fd
Merge branch 'master' into update-with-master
naglepuff Oct 17, 2024
0b08a89
Don't import `girder.logger`
naglepuff Oct 17, 2024
68f81bc
Add and support app buttons.
manthey Oct 11, 2024
18a7051
Merge pull request #428 from DigitalSlideArchive/app-button
manthey Oct 17, 2024
757a95f
Load settings earlier.
manthey Oct 17, 2024
938f474
Merge pull request #429 from DigitalSlideArchive/early-settings-load
manthey Oct 17, 2024
5f1f4f1
Update precommit packages
manthey Oct 22, 2024
13197f0
Update CI to handle a large-image mocking change
manthey Oct 29, 2024
d27c9fa
Merge pull request #434 from DigitalSlideArchive/fix-ci
manthey Oct 29, 2024
9fb3cdd
Add a pyproject.toml base to reduce pip 24.2 warnings
manthey Oct 25, 2024
ea065b2
Merge pull request #432 from DigitalSlideArchive/update-precommit
manthey Oct 29, 2024
a9cd36c
Merge pull request #433 from DigitalSlideArchive/pyproject.toml
manthey Oct 29, 2024
6c9e86b
Merge branch 'master' into update-with-master
naglepuff Oct 31, 2024
dc43dfc
Use max annotations size config
naglepuff Oct 31, 2024
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3 changes: 2 additions & 1 deletion histomicsui/rest/system.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,9 +15,9 @@
#############################################################################

import datetime
import logging
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import os

from girder import logger
from girder.api import access
from girder.api.describe import Description, autoDescribeRoute, describeRoute
from girder.api.rest import RestException, boundHandler, filtermodel
Expand All @@ -34,6 +34,7 @@

from histomicsui.constants import PluginSettings

logger = logging.getLogger(__name__)

def addSystemEndpoints(apiRoot):
"""
Expand Down