Adds MAM4xx: Aerosol wet scavenging interface #2848

odiazib · 2024-05-23T22:07:13Z

We are adding the emaxx-mam4xx interface for the aerosol wet scavenging process (mam4_wetscav). This interface computes aerdepwetis and aerdepwetcw; these variables are used to calculate surface fluxes required by the land model. Cloud-borne and interstitial aerosol mixing ratios are also updated by this routine. Finally, this routine calculates wet aerosol diameter, aerosol particle diameter, aerosol water mixing ratio, and wet aerosol density.

This interface invokes the mam4xx aero_model_wetdep routine. This routine is part of mam4xx and invokes the modal_aero_calcsize_sub and water_modal_aero_water_uptake_dr routines, as well as the core of the wet deposition routines. The inputs and outputs for this routine are presented next.

Inputs:

Variable	Description	Units
`cldfrac_liq`	Sloud fraction	fraction
`precip_total_tend`	Stratiform rain production rate	kg/kg/s
`nevapr`	Evaporation from stratiform rain	kg/kg/s

In/Out:

Variable	Description	Units
`wetdep_hydrophilic_bc`	Wet deposition of hydrophilic black carbon	kg/m2/s
`drydep_hydrophilic_bc`	Dry deposition of hydrophilic black carbon	kg/m2/s
`wetdep_hydrophilic_oc`	Wet deposition of hydrophilic organic carbon	kg/m2/s
`drydep_hydrophilic_oc`	Dry deposition of hydrophilic organic carbon	kg/m2/s
`wetdep_dust_bin1`	Wet deposition of dust (bin1)	kg/m2/s
`wetdep_dust_bin2`	Wet deposition of dust (bin2)	kg/m2/s
`wetdep_dust_bin3`	Wet deposition of dust (bin3)	kg/m2/s
`wetdep_dust_bin4`	Wet deposition of dust (bin4)	kg/m2/s
`Interstitial and cloud borne aerosols`		kg/kg/s

Output:

Variable	Description	Units
`dgncur_a`	Aerosol dry particle diameter	m
`qaerwat`	Aerosol water	kg/kg
`wetdens`	Wet aerosol density	kg/m3
`dgnumwet`	Wet aerosol diameter	m
`aerdepwetis`	aerosol wet deposition (interstitial)	kg/m2/s
`aerdepwetcw`	aerosol wet deposition (cloud water)	kg/m2/s

Testing

We have included four SCREAM standalone tests, one for a single process and 3 for multiple processes. These tests are running correctly on both CPUs and GPUs, as reported by the autotester (AT). Note that the baseline tests for these are failing because we have not created these baselines yet.
wetscav process is added as an EAMxx process with the ability to turn it on/off using the label mam4_wetscav in the namelist_scream.xml file. The atmchange command to invoke this process in a CIME simulation is:

./atmchange physics::atm_procs_list="mac_aero_mic,mam4_wetscav,rrtmgp"

To run a CIME simulation, we have created a test modifier mam4xx-wetscav:

cd cime/scripts
./create_test SMS_D_P32x1_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.<machine>_<compiler>.scream-mam4xx-wetscav -t <test id> -p <project id>

Where,
is the machine name
is the compiler to use on the machine
is a unique string test identifier
is the allocation project to charge

Validation in mam4xx.

We have created a validation test for aero_model_wetdep that utilizes data generated by E3SM v2 and using Skywalker. Additionally, all subroutines within aero_model_wetdep were verified using data generated by E3SM v2 and using Skywalker.

Important notes:

1. TODO: We need to connect the output from this process to land aerosol fluxes. We will do that in a follow-up PR (see issue #2888 ).

E3SM-Autotester · 2024-05-24T00:49:56Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-24T00:50:00Z

Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
ERROR: USER HAS COMMITTED TO PR AFTER INSPECTION, INSPECTION IS INVALID! - This PR must be re-inspected by setting label 'AT: PRE-TEST INSPECTED'.

E3SM-Autotester · 2024-05-24T00:55:15Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-24T00:55:18Z

Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.

E3SM-Autotester · 2024-05-24T01:13:44Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-25T01:13:45Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-26T01:43:43Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-27T01:43:46Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-27T16:13:49Z

Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.

E3SM-Autotester · 2024-05-27T16:43:47Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

susburrows · 2024-05-28T19:12:24Z

@odiazib , is this a WIP PR?

odiazib · 2024-05-28T20:50:13Z

@odiazib , is this a WIP PR?

@susburrows . Yes, it is. I removed the label WIP so I can run the auto tester. I will check that tests are passing in weaver/mappy. Then, this PR will be ready for review.

susburrows · 2024-05-28T21:25:45Z

@odiazib , is this a WIP PR?

@susburrows . Yes, it is. I removed the label WIP so I can run the auto tester. I will check that tests are passing in weaver/mappy. Then, this PR will be ready for review.

Sounds good! Please send me an email when it's ready for me to look at.

E3SM-Autotester · 2024-05-29T00:27:27Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-29T00:27:32Z

Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

E3SM-Autotester · 2024-05-29T03:26:25Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-05-29T12:44:54Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Build Num: 5477
Status: STARTED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;EAGLES
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`e17b6c5`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`b6131da`
TEST_REPO_ALIAS	SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Build Num: 5754
Status: STARTED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;EAGLES
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`e17b6c5`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`b6131da`
TEST_REPO_ALIAS	SCREAM

Using Repos:

Repo: SCREAM (eagles-project/scream)

Pull Request Author: odiazib

E3SM-Autotester · 2024-05-29T13:51:17Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Build Num: 5477
Status: FAILED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;EAGLES
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`e17b6c5`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`b6131da`
TEST_REPO_ALIAS	SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Build Num: 5754
Status: FAILED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;EAGLES
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`e17b6c5`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`b6131da`
TEST_REPO_ALIAS	SCREAM

SCREAM_PullRequest_Autotester_Mappy # 5477 FAILED (click to see last 100 lines of console output)


test-scheduler took 2848.8493762016296 seconds'
+ errors='Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
FAIL ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240529_070220_d8rghj
FAIL ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240529_070220_d8rghj
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240529_070220_d8rghj
DIFF ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240529_070220_d8rghj
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240529_070220_d8rghj
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240529_070220_d8rghj
test-scheduler took 2848.8493762016296 seconds'
+ V1_FAILURES_DETAILS+='Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
FAIL ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240529_070220_d8rghj
FAIL ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240529_070220_d8rghj
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240529_070220_d8rghj
DIFF ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240529_070220_d8rghj
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240529_070220_d8rghj
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240529_070220_d8rghj
test-scheduler took 2848.8493762016296 seconds'
+ set +x
######################################################
FAILS DETECTED:
  SCREAM STANDALONE TESTING FAILED!
Build type full_debug failed at testing time. Here's a list of failed tests:
286:p3_standalone_baseline_cmp
306:shoc_standalone_baseline_cmp
351:mam4_wetscav_standalone_np2_vs_np1
352:mam4_wetscav_standalone_np3_vs_np1
353:mam4_wetscav_standalone_np4_vs_np1
354:mam4_wetscav_standalone_baseline_cmp
400:homme_shoc_cld_p3_rrtmgp_pg2_baseline_cmp
424:homme_shoc_cld_spa_p3_rrtmgp_128levels_baseline_cmp
448:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
  SCREAM V1 TESTING FAILED!
Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
FAIL ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240529_070220_d8rghj
FAIL ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240529_070220_d8rghj
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240529_070220_d8rghj
DIFF ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240529_070220_d8rghj
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240529_070220_d8rghj
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240529_070220_d8rghj
test-scheduler took 2848.8493762016296 seconds
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 27517 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script  : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs
squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel
[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins9497646159883444425.sh

POST BUILD TASK : SUCCESS

END OF POST BUILD TASK : 0

Sending e-mails to: [email protected]

Finished: FAILURE

SCREAM_PullRequest_Autotester_Weaver # 5754 FAILED (click to see last 100 lines of console output)


58:virtual_temperature
59:atmosphere_density
60:vertical_layer
61:dry_static_energy
62:sea_level_pressure
63:water_path
64:shortwave_cloud_forcing
65:longwave_cloud_forcing
66:relative_humidity
67:vapor_flux
68:precip_surf_mass_flux
69:surface_upward_latent_heat_flux
70:wind_speed
71:aodvis
72:number_paths
73:aerocom_cld
74:ad_ut
76:scream_fpe_check
77:bfbhash
78:homme_standalone_np1
79:homme_standalone_baseline_cmp
80:p3_standalone_np1
81:p3_tend_check_np1
82:p3_standalone_baseline_cmp
83:shoc_standalone_np1
84:shoc_tend_check_np1
85:check_U_V_slices_np1
86:check_surf_mom_flux_slices_np1
87:shoc_standalone_baseline_cmp
88:check_U_V_slices_fail_diff
89:check_U_V_slices_fail_layout
90:check_U_V_slices_fail_missing
91:cld_fraction_standalone
92:spa_standalone_np1
93:spa_standalone_baseline_cmp
94:surface_coupling_np1
95:rrtmgp_standalone_unit
96:rrtmgp_standalone_not_chunked_np1
97:rrtmgp_standalone_chunked
98:rrtmgp_standalone_chunked_vs_not_chunked
99:rrtmgp_standalone_chunked_baseline_cmp
100:cosp_standalone_np1
101:cosp_standalone_baseline_cmp
102:mam4_optics_standalone_np1
103:mam4_optics_standalone_baseline_cmp
104:mam4_wetscav_standalone_np1
105:mam4_wetscav_standalone_baseline_cmp
106:shoc_cld_p3_rrtmgp_np1
107:shoc_cld_spa_p3_rrtmgp_np1
108:mam_optics_rrtmgp_np1
109:shoc_p3_subcycled
110:shoc_p3_monolithic
111:check_subcycling
112:check_subcycling_tend_check
113:create_vert_remap_and_weights
114:shoc_p3_source
115:shoc_p3_nudged
116:shoc_p3_nudged_remapped
117:shoc_p3_nudging_glob_novert
118:homme_shoc_cld_p3_rrtmgp_np1
119:homme_shoc_cld_p3_rrtmgp_baseline_cmp
120:homme_shoc_cld_p3_rrtmgp_pg2_np1
121:homme_shoc_cld_p3_rrtmgp_pg2_baseline_cmp
122:model_baseline
123:model_initial
124:model_restart
125:restarted_vs_monolithic_check_np1
126:homme_shoc_cld_spa_p3_rrtmgp_np1
127:homme_shoc_cld_spa_p3_rrtmgp_baseline_cmp
128:homme_shoc_cld_spa_p3_rrtmgp_128levels_np1
129:homme_shoc_cld_spa_p3_rrtmgp_128levels_tend_check_np1
130:homme_shoc_cld_spa_p3_rrtmgp_128levels_baseline_cmp
131:homme_shoc_cld_spa_p3_rrtmgp_pg2_dp_np1
132:homme_shoc_cld_spa_p3_rrtmgp_pg2_dp_baseline_cmp
133:homme_shoc_cld_p3_mam_optics_rrtmgp_np1
134:homme_shoc_cld_p3_mam_optics_rrtmgp_baseline_cmp
135:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_np1
136:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
Error(s) occurred during test phase

OVERALL STATUS: FAIL

Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5754/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -i -m weaver

RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5754/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -i -m weaver

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5754/scream/components/eamxx

weaver failed

######################################################

Build step 'Execute shell' marked build as failure

Performing Post build task...

Match found for : : True

Logical operation result is TRUE

Running script  : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh

[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins8331161238344529709.sh

POST BUILD TASK : SUCCESS

END OF POST BUILD TASK : 0

Sending e-mails to: [email protected]

Finished: FAILURE

…d namelist yaml files with new var names

…le name

E3SM-Autotester · 2024-07-06T01:10:06Z

Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.

E3SM-Autotester · 2024-07-06T01:40:04Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-07-06T01:40:11Z

Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

E3SM-Autotester · 2024-07-06T03:29:06Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

E3SM-Autotester · 2024-07-06T06:19:42Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Build Num: 5625
Status: STARTED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;Stealth
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`6de6c33`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`27b21e2`
TEST_REPO_ALIAS	SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Build Num: 5871
Status: STARTED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;Stealth
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`6de6c33`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`27b21e2`
TEST_REPO_ALIAS	SCREAM

Using Repos:

Repo: SCREAM (eagles-project/scream)

Pull Request Author: odiazib

E3SM-Autotester · 2024-07-06T07:07:59Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Build Num: 5625
Status: FAILED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;Stealth
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`6de6c33`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`27b21e2`
TEST_REPO_ALIAS	SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Build Num: 5871
Status: FAILED

Jenkins Parameters

Parameter Name	Value
PR_LABELS	AT: RETEST;AT: PRE-TEST INSPECTED;EAGLES;Stealth
PULLREQUESTNUM	2848
SCREAM_SOURCE_REPO	https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA	`6de6c33`
SCREAM_TARGET_BRANCH	master
SCREAM_TARGET_REPO	https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA	`27b21e2`
TEST_REPO_ALIAS	SCREAM

SCREAM_PullRequest_Autotester_Mappy # 5625 FAILED (click to see last 100 lines of console output)


    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240706_004856_bpd6so
test-scheduler took 909.7547452449799 seconds'
+ errors='Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240706_004856_bpd6so
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240706_004856_bpd6so
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240706_004856_bpd6so
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240706_004856_bpd6so
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240706_004856_bpd6so
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240706_004856_bpd6so
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240706_004856_bpd6so
test-scheduler took 909.7547452449799 seconds'
+ V1_FAILURES_DETAILS+='Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240706_004856_bpd6so
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240706_004856_bpd6so
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240706_004856_bpd6so
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240706_004856_bpd6so
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240706_004856_bpd6so
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240706_004856_bpd6so
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240706_004856_bpd6so
test-scheduler took 909.7547452449799 seconds'
+ set +x
######################################################
FAILS DETECTED:
  SCREAM STANDALONE TESTING FAILED!
Build type full_debug failed at testing time. Here's a list of failed tests:
368:mam4_wetscav_standalone_baseline_cmp
504:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
  SCREAM V1 TESTING FAILED!
Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240706_004856_bpd6so
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240706_004856_bpd6so
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240706_004856_bpd6so
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240706_004856_bpd6so
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240706_004856_bpd6so
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240706_004856_bpd6so
FAIL SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240706_004856_bpd6so
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240706_004856_bpd6so
test-scheduler took 909.7547452449799 seconds
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 15106 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script  : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs
squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel
[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins13854165852922325361.sh

POST BUILD TASK : SUCCESS

END OF POST BUILD TASK : 0

Sending e-mails to: [email protected]

Finished: FAILURE

SCREAM_PullRequest_Autotester_Weaver # 5871 FAILED (click to see last 100 lines of console output)


108:mam4_aci_standalone_baseline_cmp
110:mam4_wetscav_standalone_baseline_cmp
147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:

93:mam4_aci_standalone_baseline_cmp

95:mam4_wetscav_standalone_baseline_cmp
Build type release failed at testing time. Here'''s a list of failed tests:

107:mam4_aci_standalone_baseline_cmp

109:mam4_wetscav_standalone_baseline_cmp

146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
Error(s) occurred during test phase

OVERALL STATUS: FAIL

Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx

weaver failed'

errors='Build type full_debug failed at testing time. Here'''s a list of failed tests:

108:mam4_aci_standalone_baseline_cmp

110:mam4_wetscav_standalone_baseline_cmp

147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:

93:mam4_aci_standalone_baseline_cmp

95:mam4_wetscav_standalone_baseline_cmp
Build type release failed at testing time. Here'''s a list of failed tests:

107:mam4_aci_standalone_baseline_cmp

109:mam4_wetscav_standalone_baseline_cmp

146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
Error(s) occurred during test phase

OVERALL STATUS: FAIL

Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx

weaver failed'

SA_FAILURES_DETAILS+='Build type full_debug failed at testing time. Here'''s a list of failed tests:

108:mam4_aci_standalone_baseline_cmp

110:mam4_wetscav_standalone_baseline_cmp

147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:

93:mam4_aci_standalone_baseline_cmp

95:mam4_wetscav_standalone_baseline_cmp
Build type release failed at testing time. Here'''s a list of failed tests:

107:mam4_aci_standalone_baseline_cmp

109:mam4_wetscav_standalone_baseline_cmp

146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
Error(s) occurred during test phase

OVERALL STATUS: FAIL

Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx

weaver failed'

[[ 1 == 0 ]]
[[ weaver == \m\a\p\p\y ]]
set +x

######################################################

FAILS DETECTED:

SCREAM STANDALONE TESTING FAILED!

Build type full_debug failed at testing time. Here's a list of failed tests:

108:mam4_aci_standalone_baseline_cmp

110:mam4_wetscav_standalone_baseline_cmp

147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here's a list of failed tests:

93:mam4_aci_standalone_baseline_cmp

95:mam4_wetscav_standalone_baseline_cmp
Build type release failed at testing time. Here's a list of failed tests:

107:mam4_aci_standalone_baseline_cmp

109:mam4_wetscav_standalone_baseline_cmp

146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
Error(s) occurred during test phase

OVERALL STATUS: FAIL

Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5871/scream/components/eamxx

weaver failed

######################################################

Build step 'Execute shell' marked build as failure

Performing Post build task...

Match found for : : True

Logical operation result is TRUE

Running script  : #!/bin/bash -le
cd $WORKSPACE/${BUILD_ID}/
./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh

[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins12906373918729169525.sh

POST BUILD TASK : SUCCESS

END OF POST BUILD TASK : 0

Sending e-mails to: [email protected]

Finished: FAILURE

E3SM-Autotester removed the AT: PRE-TEST INSPECTED When pre-test inspection is required, set this label to pass the inspection label May 24, 2024

odiazib mentioned this pull request May 24, 2024

Oscar/wet dep integration eagles-project/mam4xx#303

Merged

E3SM-Autotester removed the AT: PRE-TEST INSPECTED When pre-test inspection is required, set this label to pass the inspection label May 29, 2024

E3SM-Autotester removed the AT: RETEST Force the autotester (AT) to retest the PR label May 29, 2024

singhbalwinder and others added 17 commits July 5, 2024 18:08

Completed a round of cleanup- variables rearranged to match i/o-3

f52f628

Adds a multi-process test: p3-wetscav

870e978

Adds missing files for the new multi-process test

8a81e1c

Adds another multi-process test for wetscav

64fc5a3

updated submodule to a newer version

0ec3227

Cleans wetscav hpp file and minor changes to the cpp file

d00cd50

Adds descriptive var names; removes conv vars from FM; fixes input an…

dd7e21b

…d namelist yaml files with new var names

Adds const for input vars, removes scorpio temp change

e6610dd

Cleans up namelist xml file and removes double ICs

8c7d2a7

Removes a left over comment

83a85eb

Minor change in comments

140ee78

wet_scav - Removing Kokkos::resize.

aed9ffc

Fixes some test fails: remove old output varnames, fixed output nc fi…

019a54c

…le name

Adds TODO to a comment as some editors can highlight these comments

fe66519

Fixes previous commit: Adds a TODO comment here

af58453

Adds a new function to add additional tracers for MAM4xx

4d3b7bc

Adds the new script for computing number of tracers

6de6c33

singhbalwinder added the AT: PRE-TEST INSPECTED When pre-test inspection is required, set this label to pass the inspection label Jul 6, 2024

singhbalwinder force-pushed the oscar/wet_scav_strt_balwinder branch from 0e93c11 to 6de6c33 Compare July 6, 2024 01:28

E3SM-Autotester removed the AT: PRE-TEST INSPECTED When pre-test inspection is required, set this label to pass the inspection label Jul 6, 2024

singhbalwinder added the AT: PRE-TEST INSPECTED When pre-test inspection is required, set this label to pass the inspection label Jul 6, 2024

E3SM-Autotester removed the AT: RETEST Force the autotester (AT) to retest the PR label Jul 6, 2024

singhbalwinder added AT: WIP Inform the autotester (AT) that the PR is a work in progress, and should not be tested and removed AT: PRE-TEST INSPECTED When pre-test inspection is required, set this label to pass the inspection labels Jul 6, 2024

Adds MAM4xx: Aerosol wet scavenging interface #2848

Are you sure you want to change the base?

Adds MAM4xx: Aerosol wet scavenging interface #2848

Conversation

odiazib commented May 23, 2024 • edited by singhbalwinder Loading

Inputs:

In/Out:

Output:

Testing

Validation in mam4xx.

Important notes:

E3SM-Autotester commented May 24, 2024

E3SM-Autotester commented May 24, 2024

E3SM-Autotester commented May 24, 2024

E3SM-Autotester commented May 24, 2024

E3SM-Autotester commented May 24, 2024

E3SM-Autotester commented May 25, 2024

E3SM-Autotester commented May 26, 2024

E3SM-Autotester commented May 27, 2024

E3SM-Autotester commented May 27, 2024

E3SM-Autotester commented May 27, 2024

susburrows commented May 28, 2024

odiazib commented May 28, 2024

susburrows commented May 28, 2024

E3SM-Autotester commented May 29, 2024

E3SM-Autotester commented May 29, 2024

E3SM-Autotester commented May 29, 2024

E3SM-Autotester commented May 29, 2024

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Jenkins Parameters

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Jenkins Parameters

Using Repos:

E3SM-Autotester commented May 29, 2024

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Jenkins Parameters

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Jenkins Parameters

We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs

E3SM-Autotester commented Jul 6, 2024

E3SM-Autotester commented Jul 6, 2024

E3SM-Autotester commented Jul 6, 2024

E3SM-Autotester commented Jul 6, 2024

E3SM-Autotester commented Jul 6, 2024

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Jenkins Parameters

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Jenkins Parameters

Using Repos:

E3SM-Autotester commented Jul 6, 2024

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

Jenkins Parameters

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

Jenkins Parameters

We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs

odiazib commented May 23, 2024 •

edited by singhbalwinder

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