Releases · ExploreASL/cvasl

04 Sep 16:44

brainspinner

v0.0.7

416d0dc

v0.0.7 Latest

Latest

Commits

416d0dc: ssyntx fix (Candace Moore)

Assets 2

23 Jul 19:26

brainspinner

v0.0.4

f5930f8

v0.0.4

Commits

4b993af: vendor/comscan: fix incomplete vendoring of ComScan (Suvayu Ali) #251
3d1b3e4: environment.yml: one environment to run all vendored packages (Suvayu Ali) #251
bc68a6c: environment.yml: relax python version requirement (Suvayu Ali) #251
319dfda: vendor/comscan: fix relative imports from neurocomnat (Suvayu Ali) #251
9e18d90: add tqdm to setup (Candace Moore) #251
748b828: squashed fixing sphinx (Candace Moore) #251
68f3a36: checking ci with new numpy (Candace Moore) #251
70def34: fix linting (Candace Moore) #251
290795a: len(e) (Candace Moore) #251
933ebbf: extend visualization (Candace Moore) #255
c635c23: base functions of relief1 (Candace Moore) #255
4bd2d0b: relief5way harm accomplished (Candace Moore) #255
13cb840: add relief topmri vs edis (Candace Moore) #255
233a89d: finish relief for helius (Candace Moore) #255
316bb2d: add 3h notebook (Candace Moore) #255
2635146: 1h ml notebook (Candace Moore) #255
2472bcb: finish all relied harmonizations (Candace Moore) #255
858f23a: notebooks for relief result (Candace Moore) #255
f26eeb6: add frozen folder (Candace Moore) #255
de4e6d4: starting super-harmonic env (Candace Moore) #255
1df3197: vendor/comscan: fix incomplete vendoring of ComScan (Suvayu Ali) #255
cbbd549: final ready for release (Candace Moore) #256
f5930f8: fix about HEAD (Candace Moore) #256

Assets 6

20 Jun 12:30

brainspinner

v0.0.3

3e465da

v0.0.3

Commits

792bed9: establish develop branch (Candace Moore) #214
74ac458: question develop (Candace Moore) #214
7f87cfa: add pytest based run (Candace Moore) #214
11c6550: get libraries (Candace Moore) #214
b29e659: question lin t pycodestyle (Candace Moore) #214
ea52ce4: fix ci (Candace Moore) #214
69352b7: changing ci to install pytest (Candace Moore) #214
bedc26f: install in ci setup (Candace Moore) #214
3214f8e: try nbmake ci in container (Candace Moore) #214
b8cd1bd: miassing tick (Candace Moore) #214
9517c29: fixing relevant openwork notebooks (Candace Moore) #214
fdb5ef1: pull nbmake from ci (Candace Moore) #214
d7b98bd: try only one nb folder (Candace Moore) #214
31d9ec4: new enviro (Candace Moore) #214
e61da81: remove ci nbmake due to lack of data (Candace Moore) #214
16524b9: fix bug, typos (Candace Moore) #214
798db0e: update documentation (Candace Moore) #214
0410784: clean sabre (Candace Moore) #214
3dca5e3: add autocombat1,1d (Candace Moore) #214
03f5b26: final autocombat on all (Candace Moore) #214
a733179: add 2 level autocombat experiments (Candace Moore) #214
3e560fb: 3d autoharm (Candace Moore) #214
77e31f3: seperate and explain testing environments (Candace Moore) #214
1b6bdef: add option for fine grained autocombat split to all experi (Candace Moore) #214
6b31728: start neuroHarmony (Candace Moore) #214
d362095: change env, add sabre versus neuroharm (Candace Moore) #214
6608814: finish all neurharmonized file makeing (Candace Moore) #214
f0dcec8: experiment 1e (Candace Moore) #214
6c8d6dc: better named, add neuroharm to 2 exp (Candace Moore) #214
9336dc6: add exp 3e (Candace Moore) #214
5a78b4f: start covbat (Candace Moore) #214
702b6ad: starting covbat 2 (Candace Moore) #214
9ee405c: example of better shuffle split (Candace Moore) #214
18ebb81: #160 changed neuroharmony to neuroHarmonize (mdijsselhof) #214
ed37d59: #156 changed the previous k-fold to double-stratified (mdijsselhof) #214
84c66db: revert legacy and other old notebooks (Candace Moore) #214
58d3549: open branch to do seperate extended sets and add covbat (Candace Moore) #214
91d3c34: try to fix medical professionals doc (Candace Moore) #214
c0e4dd3: data check for extended (Candace Moore) #214
89d549b: start on 1a (Candace Moore) #214
fea0dc1: unharmoinzed as (Candace Moore) #214
2527f93: fix 3a, add harmonizations folder (Candace Moore) #214
5053023: fixing harmonization for new top and mri extended (Candace Moore) #214
a6097ef: extended experiment 1b (Candace Moore) #214
0a9fdc0: extended topmri vs sabre (Candace Moore) #214
fdc9fdf: add insight extended neurocombat harm (Candace Moore) #214
d211260: neurocombat edis (Candace Moore) #214
48ac17e: add ml_experiment2bc edis (Candace Moore) #214
ccc6d30: open nested for extended (Candace Moore) #214
0b8646d: add open nest sabre , update harmony (Candace Moore) #214
123026a: more open nested vs sets (Candace Moore) #214
988cbe4: fixing environment and INI sex problem (Candace Moore) #214
88f3025: try workflow with nC (Candace Moore) #214
2a5816a: isolate opennest requirements (Candace Moore) #214
ebc4838: clean extended (Candace Moore) #214
f907c52: more cleaning (Candace Moore) #214
7fd8eab: spce in harmony (Candace Moore) #214
d572846: reorg to vendor (Candace Moore) #214
5cf12a3: add more to vendor (Candace Moore) #214
5e5e1ba: sphinx lint neurcombat (Candace Moore) #214
fd18896: another sphinx lint (Candace Moore) #214
9b1bb99: sphinx lint neurcombat again (Candace Moore) #214
94600e8: sphinx lint neurcombat again2 (Candace Moore) #214
f8cd395: finalfix sphinx (Candace Moore) #214
27a5a72: sphinx fix opennested (Candace Moore) #214
ef8bc23: finish reorg (Candace Moore) #214
87d3a50: add covbat folder (Candace Moore) #214
8580417: autocombat start (Candace Moore) #214
4b25900: do not lint vendor (Candace Moore) #214
98627fa: more autocombat (Candace Moore) #214
3d7b1c6: all autocombat harmonizations (Candace Moore) #214
7bc2e78: debug autocombat insight (Candace Moore) #214
a3bfded: add all autocombat i.e. on edis (Candace Moore) #214
28dc292: neuroharmonizations (Candace Moore) #214
4a970e2: neuroharmonization notebooks (Candace Moore) #214
a1fa20a: fix harmonization sex (Candace Moore) #214
57315df: implement covbat top vs mri (Candace Moore) #214
c4ef3d4: finish covbat harmonizations (Candace Moore) #214
1955b9e: start covbat notebooks (Candace Moore) #214
ccd6eca: finish covbat harm notebooks (Candace Moore) #214
d0bc148: add plusplus harmonization top mri (Candace Moore) #214
a88082c: finish all combat++ harmonizations (Candace Moore) #214
384bafb: notebook 1g (Candace Moore) #214
06e239b: negative checker function (Candace Moore) #214
542bb20: all plus notebooks (Candace Moore) #214
14f5247: proof covbat notebooks (Candace Moore) #214
4723ffb: more notebook proofinf (Candace Moore) #214
4193367: add 3f and 3g placeholders (Candace Moore) #214
2f598ac: try all os workflow (Candace Moore) #214
3660e08: one os workflow (Candace Moore) #214
67d79fc: new workflow for testing (Candace Moore) #214
857df44: clean new testing schema (Candace Moore) #214
e5856d9: correct testcore (Candace Moore) #214
b36242e: stechnical paper com...

Assets 6

15 Dec 14:10

brainspinner

v0.0.2

fdb040f

v0.0.2

Commits

bfffcb8: zenodo badge (Candace Makeda Moore, MD) #126
2d4ea8b: add back mac for next release (Candace Makeda Moore, MD) #126
85e021a: experiment top based (Candace Makeda Moore, MD) #127
33fc742: mri models (Candace Makeda Moore, MD) #127
dfa6ae5: experiment 3 (Candace Makeda Moore, MD) #127
fbd4321: ml3 directions (Candace Makeda Moore, MD) #127
5605701: filtered top (Candace Makeda Moore, MD) #127
a83aa30: update with perceptron (Candace Makeda Moore, MD) #127
978e364: frozen save (Candace Makeda Moore, MD) #127
95bd358: extratree and elasticnet (Candace Makeda Moore, MD) #127
41877f8: neurcombat rebuilding (Candace Makeda Moore, MD) #127
5a4ba83: harmony (Candace Makeda Moore, MD) #127
701fd9c: finish neuroharm (Candace Makeda Moore, MD) #127
8b187d9: close stuff later (Candace Makeda Moore, MD) #127
1feb8e2: add experi4-6 (Candace Makeda Moore, MD) #127
bf49009: why (Candace Makeda Moore, MD) #127
83495a8: besties (Candace Makeda Moore, MD) #127
ce80a44: notebook fiasco (Candace Makeda Moore, MD) #127
28ec822: fiascolast2 (Candace Makeda Moore, MD) #127
3ac39cd: still ion 6 (Candace Makeda Moore, MD) #127
760b3e4: distributions and logs (Candace Makeda Moore, MD) #127
38a25ee: regraph (Candace Makeda Moore, MD) #127
b579fc8: check harm (Candace Makeda Moore, MD) #127
c899e2c: districheck (Candace Makeda Moore, MD) #127
6c3fc91: log too harmony (Candace Makeda Moore, MD) #127
7914e82: found bug (Candace Makeda Moore, MD) #127
dd8d9b8: experi789 (Candace Makeda Moore, MD) #127
f8bf0af: shorten neuroharm (Candace Makeda Moore, MD) #127
daea687: neuroharmsynth (Candace Makeda Moore, MD) #127
521a49f: new log_harm (Candace Makeda Moore, MD) #127
c908e24: onzeker (Candace Makeda Moore, MD) #127
721461f: start open nested (Candace Makeda Moore, MD) #127
c8e0ad8: changes to new opennested enviro (Candace Makeda Moore, MD) #127
73bdcb3: made opnmri and top (Candace Makeda Moore, MD) #127
4faae96: notebooks for opn based experi (Candace Makeda Moore, MD) #127
16262a6: filepaths (Candace Makeda Moore, MD) #127
a0c0293: save sex (Candace Makeda Moore, MD) #127
48cd557: opnnestmodelsgood (Candace Makeda Moore, MD) #127
8f1418a: unarmonized on less (Candace Makeda Moore, MD) #127
461360d: add harmonized minus wmh info (Candace Makeda Moore, MD) #127
16e906e: less series (Candace Makeda Moore, MD) #127
c6ff84a: found bug (Candace Makeda Moore, MD) #127
4f3b459: neurocombat better (Candace Makeda Moore, MD) #127
7b2aa06: build tables (Candace Makeda Moore, MD) #127
be66e19: lint and start viz funct (Candace Makeda Moore, MD) #127
8ac142c: fix experi 1 (Candace Makeda Moore, MD) #127
50e6d4d: fix seperate generated_transform_matrix docu (Candace Makeda Moore, MD) #127
6181d85: add homemade (Candace Makeda Moore, MD) #127
09fd540: functions to library for poly remapping (Candace Makeda Moore, MD) #127
7782aba: try different sphinx inset order on ci (Candace Makeda Moore, MD) #127
ec856bf: Try to install imageio before it's installed as a dependency of scikit-learn (Candace Makeda Moore, MD) #127
b783af4: Upgrade github pages action (CI) due to deprecation warnings (Candace Makeda Moore, MD) #127
ed114bd: fix docu (Candace Moore) #134
f320eb1: quick docu format fix (Candace Moore) #134
25869da: add sabre unharmonized 12 (Candace Makeda Moore, MD) #133
10f6355: first notebook done (Candace Makeda Moore, MD) #133
eeb1e52: done 1 and 2 (Candace Makeda Moore, MD) #133
622cbda: start 3 (Candace Makeda Moore, MD) #133
86ef1dd: start 3 (Candace Makeda Moore, MD) #133
44224ae: finish3 (Candace Makeda Moore, MD) #133
fdcdf13: 3waysabre (Candace Makeda Moore, MD) #133
4cae523: experi 4 (Candace Makeda Moore, MD) #133
28fe05f: 5n (Candace Makeda Moore, MD) #133
f892a3d: 6n (Candace Makeda Moore, MD) #133
58e77ad: 3 way open nested (Candace Makeda Moore, MD) #133
ba034ed: 3way opn (Candace Makeda Moore, MD) #133
a62d31d: start 10n (Candace Makeda Moore, MD) #133
9c7707f: 10n continues (Candace Makeda Moore, MD) #133
244d65f: Insight dataset assembly (Candace Makeda Moore, MD) #133
c406518: renew pcv2c on Insight (Candace Makeda Moore, MD) #133
eacf92d: full experiment1 (Candace Makeda Moore, MD) #133
870a952: add stratified and shuffled cross validation for linear regressor as example (gcroci2) #133
ae134f0: y_fold and dataframes (Candace Makeda Moore, MD) #133
0dced7b: functioning kfold average (Candace Makeda Moore, MD) #133
e193186: moving exp3 (Candace Makeda Moore, MD) #133
86d3f60: proper sav files (Candace Makeda Moore, MD) #133
ca2a593: 3wayneuro requ (Candace Makeda Moore, MD) #133
5d72245: new neurocombat harm (Candace Makeda Moore, MD) #133
26d7d14: proper presplit (Candace Makeda Moore, MD) #133
d72f760: open nested requested (Candace Makeda Moore, MD) #133
a0e513c: all 3 includes open nested (Candace Makeda Moore, MD) #133
20965c5: 3 as quested (Candace Makeda Moore, MD) #133
509ab6e: quested2 (Candace Makeda Moore, MD) #133
5105ca0: update open nexted (Candace Makeda Moore, MD) #133
6bb4f91: final 3s (Candace Makeda Moore, MD) #133
4bd91a0: delete accidental files (Candace Makeda Moore, MD) #133
1493122: proper 1a (Candace Makeda Moore, MD) #133
c65ff0a: second half1a (Candace Makeda Moore, MD) #133
b34e6ad: Improve format of CITATION.cff (Giulia Crocioni) #133
3573d2c: open neuroharm2 way (Candace Makeda Moore, MD) [#133](#133...