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HighlanderLab

Software for the management and improvement of populations using data science, genetics, and breeding

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  1. jbancic_alphasimr_plants jbancic_alphasimr_plants Public

    Plant breeding simulations with AlphaSimR

    HTML 9 6

  2. jbancic_GEIsim jbancic_GEIsim Public

    This repository contains examples of code for simulating genotype by environment interaction

    R 4 1

  3. tree_seq_pipeline tree_seq_pipeline Public

    Pipeline to infer tree sequences with different datasets

    Python 3 7

  4. gfortuna_mtdna_breed gfortuna_mtdna_breed Public

    Accounting for nuclear - and mito-genome in dairy cattle breeding: a simulation study

    R 2

  5. nlubanga_tea_breeding_gs nlubanga_tea_breeding_gs Public

    Simulation of tea breeding programmes using genomic selection

    R 2 1

  6. AlphaFamImpute AlphaFamImpute Public

    Forked from AlphaGenes/AlphaFamImpute

    Python 1

Repositories

Showing 10 of 50 repositories
  • jbancic_alphasimr_plants Public

    Plant breeding simulations with AlphaSimR

    HighlanderLab/jbancic_alphasimr_plants’s past year of commit activity
    HTML 9 6 0 0 Updated Jul 2, 2024
  • SIMplyBee Public

    SIMplyBee R package extends AlphaSimR for simulating honeybee populations and breeding programmes

    HighlanderLab/SIMplyBee’s past year of commit activity
    R 0 5 67 2 Updated Jun 30, 2024
  • jbancic_GEIsim Public

    This repository contains examples of code for simulating genotype by environment interaction

    HighlanderLab/jbancic_GEIsim’s past year of commit activity
    R 4 1 0 0 Updated Jun 7, 2024
  • lstrachan_honeybee_relatedness Public

    Honeybee simulations

    HighlanderLab/lstrachan_honeybee_relatedness’s past year of commit activity
    R 0 0 0 0 Updated May 20, 2024
  • AlphaSimR Public Forked from gaynorr/AlphaSimR

    R package for breeding program simulations

    HighlanderLab/AlphaSimR’s past year of commit activity
    R 0 16 0 0 Updated May 4, 2024
  • vbrajkovic_cattle_mtdna Public

    Analysis of the effect of mtDNA on dairy cattle performance

    HighlanderLab/vbrajkovic_cattle_mtdna’s past year of commit activity
    R 1 MIT 0 0 0 Updated May 1, 2024
  • tree_seq_pipeline Public

    Pipeline to infer tree sequences with different datasets

    HighlanderLab/tree_seq_pipeline’s past year of commit activity
    Python 3 MIT 7 15 1 Updated Apr 12, 2024
  • sheepTSexample Public
    HighlanderLab/sheepTSexample’s past year of commit activity
    HTML 0 MIT 1 0 0 Updated Mar 11, 2024
  • gfortuna_mtdna_breed Public

    Accounting for nuclear - and mito-genome in dairy cattle breeding: a simulation study

    HighlanderLab/gfortuna_mtdna_breed’s past year of commit activity
    R 2 0 0 0 Updated Feb 25, 2024
  • vpapin_pine_gs Public

    Simulation of genomic prediction in maritime pine and factors affecting its accuracy

    HighlanderLab/vpapin_pine_gs’s past year of commit activity
    R 0 0 0 0 Updated Dec 31, 2023
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