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2.0.0-beta.3 #1148

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2.0.0-beta.3

2.0.0-beta.3 #1148

Triggered via pull request August 6, 2024 09:13
@nebfieldnebfield
synchronize #349
match-fix
Status Cancelled
Total duration 12m 35s
Artifacts 3

ci.yml

on: pull_request
preload_docker  /  docker
3m 12s
preload_docker / docker
preload_singularity  /  singularity
49s
preload_singularity / singularity
preload_ancestry  /  preload_reference
4s
preload_ancestry / preload_reference
Matrix: pytest_workflow_docker
Matrix: standard_test_docker / docker
Matrix: standard_test_docker / singularity
Matrix: pytest_workflow_singularity
Matrix: standard_test_singularity / docker
Matrix: standard_test_singularity / singularity
ancestry_docker  /  docker
7m 4s
ancestry_docker / docker
ancestry_docker  /  singularity
0s
ancestry_docker / singularity
ancestry_vcf_docker  /  docker
9m 1s
ancestry_vcf_docker / docker
ancestry_vcf_docker  /  singularity
0s
ancestry_vcf_docker / singularity
ancestry_singularity  /  docker
0s
ancestry_singularity / docker
ancestry_singularity  /  singularity
7m 32s
ancestry_singularity / singularity
ancestry_vcf_singularity  /  docker
0s
ancestry_vcf_singularity / docker
ancestry_vcf_singularity  /  singularity
8m 27s
ancestry_vcf_singularity / singularity
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35 errors
pytest_workflow_singularity (test match module) / singularity
Process completed with exit code 1.
pytest_workflow_singularity (test input check subworkflow with PGS catalog API and whitespace) / singularity
FailFast: cancelling since parallel instance has failed
pytest_workflow_singularity (test match combine module) / singularity
FailFast: cancelling since parallel instance has failed
pytest_workflow_singularity (test match combine module) / singularity
The operation was canceled.
pytest_workflow_singularity (test apply score subworkflow) / singularity
FailFast: cancelling since parallel instance has failed
pytest_workflow_singularity (test apply score subworkflow) / singularity
The operation was canceled.
pytest_workflow_singularity (test combine scorefiles module) / singularity
FailFast: cancelling since parallel instance has failed
pytest_workflow_singularity (test combine scorefiles module) / singularity
The operation was canceled.
pytest_workflow_singularity (pgscatalog test --efo_trait --pgp_id and --pgs_id) / singularity
FailFast: cancelling since parallel instance has failed
pytest_workflow_singularity (pgscatalog test --efo_trait --pgp_id and --pgs_id) / singularity
The operation was canceled.
pytest_workflow_singularity (test perfect apply score) / singularity
FailFast: cancelling since parallel instance has failed
pytest_workflow_singularity (test perfect apply score) / singularity
The operation was canceled.
pytest_workflow_docker (test match combine module) / docker
Process completed with exit code 1.
pytest_workflow_docker (test match module) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test match module) / docker
Process completed with exit code 1.
pytest_workflow_docker (pgscatalog test --pgs_id) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (plink2 testscore) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test make compatible subworkflow with bfile) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test make compatible subworkflow with bfile) / docker
The operation was canceled.
pytest_workflow_docker (plink2 testmultiscorefail) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (plink2 testmultiscorefail) / docker
The operation was canceled.
pytest_workflow_docker (test perfect apply score) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test perfect apply score) / docker
The operation was canceled.
pytest_workflow_docker (plink2 testsmallscore) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (plink2 testsmallscore) / docker
The operation was canceled.
pytest_workflow_docker (test make compatible subworkflow with pfile) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test make compatible subworkflow with pfile) / docker
The operation was canceled.
pytest_workflow_docker (test input check subworkflow with PGS catalog API) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test input check subworkflow with PGS catalog API) / docker
The operation was canceled.
pytest_workflow_docker (pgscatalog test --efo_trait --pgp_id and --pgs_id) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (pgscatalog test --efo_trait --pgp_id and --pgs_id) / docker
The operation was canceled.
pytest_workflow_docker (test combine scorefiles module) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test combine scorefiles module) / docker
The operation was canceled.
pytest_workflow_docker (test apply score subworkflow) / docker
FailFast: cancelling since parallel instance has failed
pytest_workflow_docker (test apply score subworkflow) / docker
The operation was canceled.

Artifacts

Produced during runtime
Name Size
logs-docker-test match combine module
138 KB
logs-docker-test match module
102 KB
logs-singularity-test match module
103 KB