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@PathwayAnalysisPlatform

PathwayAnalysisPlatform

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  1. PathwayMatcher_Dev PathwayMatcher_Dev Public archive

    PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://g…

    Java 6 1

  2. PathwayMatcher PathwayMatcher Public

    PathwayMatcher is a free, open-source software to search for pathways related to a list of genes, proteins or proteoforms in Reactome.

    Java 2 2

  3. PathwayStructure PathwayStructure Public

    Java 1

  4. ProteoformNetworks ProteoformNetworks Public

    Tests to prove usefulness of proteoform networks

    Jupyter Notebook 1 1

  5. Extractor Extractor Public archive

    Tool for creating static mapping files from multiples data types to the reactions and pathways in the Reactome graph database.

    Java 1

  6. Model Model Public archive

    Set of classes to represent the objects related to pathway analysis

    Java

Repositories

Showing 10 of 14 repositories
  • ProteoformNetworks Public

    Tests to prove usefulness of proteoform networks

    PathwayAnalysisPlatform/ProteoformNetworks’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 1 1 3 Updated Oct 18, 2023
  • Networks Public

    Protein and proteoform interaction networks created from Pathways in Reactome.

    PathwayAnalysisPlatform/Networks’s past year of commit activity
    0 0 0 0 Updated May 18, 2023
  • PathwayStructure Public
    PathwayAnalysisPlatform/PathwayStructure’s past year of commit activity
    Java 1 Apache-2.0 0 0 0 Updated Apr 19, 2023
  • PathwayMatcher Public

    PathwayMatcher is a free, open-source software to search for pathways related to a list of genes, proteins or proteoforms in Reactome.

    PathwayAnalysisPlatform/PathwayMatcher’s past year of commit activity
    Java 2 2 0 3 Updated Jun 4, 2021
  • PathwayMatcher_Publication Public

    Source code, data files and figures for the PathwayMatcher manuscript.

    PathwayAnalysisPlatform/PathwayMatcher_Publication’s past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Mar 27, 2020
  • ProteoformNetworks_resources Public

    Data files and result tables for the project ProteoformNetworks, which compares the overlap between trait modules at gene and proteoform level.

    PathwayAnalysisPlatform/ProteoformNetworks_resources’s past year of commit activity
    0 0 0 0 Updated Oct 2, 2019
  • MappingFiles Public

    Tables create with Variant Effect Predictor (VEP) to map from genetic variants to gene names and Swiss Prot accessions.

    PathwayAnalysisPlatform/MappingFiles’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Apr 4, 2019
  • PathwayMatcher_Dev Public archive

    PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://github.com/PathwayAnalysisPlatform/PathwayMatcher

    PathwayAnalysisPlatform/PathwayMatcher_Dev’s past year of commit activity
    Java 6 Apache-2.0 1 0 0 Updated Mar 4, 2019
  • Methods Public archive

    Java implementation of Methods to search and analyse pathways

    PathwayAnalysisPlatform/Methods’s past year of commit activity
    Java 0 Apache-2.0 0 0 0 Updated Feb 28, 2019
  • Model Public archive

    Set of classes to represent the objects related to pathway analysis

    PathwayAnalysisPlatform/Model’s past year of commit activity
    Java 0 Apache-2.0 0 0 0 Updated Feb 28, 2019
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