Add more connections.

PennLINC · Nov 8, 2023 · fde16d6 · fde16d6
1 parent b8af969
commit fde16d6
Showing 1 changed file with 19 additions and 1 deletion.
diff --git a/aslprep/workflows/asl/outputs.py b/aslprep/workflows/asl/outputs.py
@@ -69,58 +69,76 @@ def init_asl_derivatives_wf(
                 "asl_native",
                 "asl_t1",
                 "asl_std",
+                "asl_cifti",
                 "aslref_native",
                 "aslref_t1",
                 "aslref_std",
                 "asl_mask_native",
                 "asl_mask_t1",
                 "asl_mask_std",
                 # Transforms
+                "hmc_xforms",
                 "aslref_to_anat_xfm",
                 "anat_to_aslref_xfm",
                 # Standard CBF outputs
                 "cbf_ts_native",
                 "cbf_ts_t1",
                 "cbf_ts_std",
+                "cbf_ts_cifti",
                 "mean_cbf_native",
                 "mean_cbf_t1",
                 "mean_cbf_std",
+                "mean_cbf_cifti",
                 "att_native",
                 "att_t1",
                 "att_std",
+                "att_cifti",
                 # SCORE/SCRUB outputs
                 "cbf_ts_score_native",
                 "cbf_ts_score_t1",
                 "cbf_ts_score_std",
+                "cbf_ts_score_cifti",
                 "mean_cbf_score_native",
                 "mean_cbf_score_t1",
                 "mean_cbf_score_std",
+                "mean_cbf_score_cifti",
                 "mean_cbf_scrub_native",
                 "mean_cbf_scrub_t1",
                 "mean_cbf_scrub_std",
+                "mean_cbf_scrub_cifti",
                 # BASIL outputs
                 "mean_cbf_basil_native",
                 "mean_cbf_basil_t1",
                 "mean_cbf_basil_std",
+                "mean_cbf_basil_cifti",
                 "mean_cbf_gm_basil_native",
                 "mean_cbf_gm_basil_t1",
                 "mean_cbf_gm_basil_std",
+                "mean_cbf_gm_basil_cifti",
                 "mean_cbf_wm_basil_native",
                 "mean_cbf_wm_basil_t1",
                 "mean_cbf_wm_basil_std",
+                "mean_cbf_wm_basil_cifti",
                 "att_basil_native",
                 "att_basil_t1",
                 "att_basil_std",
+                "att_basil_cifti",
                 # Parcellated CBF outputs
                 "atlas_names",
                 "mean_cbf_parcellated",
                 "mean_cbf_score_parcellated",
                 "mean_cbf_scrub_parcellated",
                 "mean_cbf_basil_parcellated",
                 "mean_cbf_gm_basil_parcellated",
-                # non-GE outputs
+                # Non-GE outputs
                 "confounds",
                 "confounds_metadata",
+                # CIFTI-related outputs
+                "cifti_metadata",
+                "cifti_density",
+                "goodvoxels_mask",
+                "surf_files",
+                "surf_refs",
             ],
         ),
         name="inputnode",