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Update pybids requirement from <=0.17.1 to <=0.17.2 #443

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merged 1 commit into from
Sep 23, 2024

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@dependabot dependabot bot commented on behalf of github Sep 23, 2024

Updates the requirements on pybids to permit the latest version.

Release notes

Sourced from pybids's releases.

0.17.2

Release Notes

Bug-fix release in the 0.17.x series.

Changes

New Contributors

Full Changelog: bids-standard/pybids@0.17.1...0.17.2

Changelog

Sourced from pybids's changelog.

Version 0.17.2 (September 19, 2024)

Bug-fix release in the 0.17.x series.

  • BUG: symlink dirs treated as files during indexing (#1087)

Version 0.17.1 (September 06, 2024)

Bug-fix release in the 0.17.x series.

Mostly quiets down warnings generated by more recent versions of Pandas.

  • FIX: Create indices with object dtype (#1084)
  • MNT: Transfer validation tests to bids validator (#1081)

Version 0.17.0 (July 29, 2024)

Feature release in the 0.17.x series.

This release includes experimental support for MRS (BEP22) datasets and universal_pathlib <https://github.com/fsspec/universal_pathlib>__.

  • ENH: pathlib -> universal_pathlib to enable cloud (and other filesystem) support (#1074)
  • ENH: Add MRS entities, path patterns (#1075)
  • STY: No parentheses after assert (#1065)
  • MNT: Bump bids-examples from 47c4da1 to 401f4cf (#1073)
  • MNT: Fix typo newly found by codespell (#1066)

Version 0.16.5 (May 22, 2024)

Bug-fix release in the 0.16.x series.

This release includes minor fixes, but reworks the testing infrastructure and resolves Python 3.12 incompatibilities.

  • FIX: Handle FileNotFoundError in BIDSLayout init when is_derivative=True and validate=False (#1049)
  • FIX: Add dwi root sbref, missing dwi entities to path patterns (#1059)
  • ENH: Update indexer to treat .zarr as files not dirs (#1046)
  • DOC: Deal with several warnings and errors in the doc build (#1061)
  • TST: Add bids-examples tests to cover ieeg, eeg, dwi (#1060)
  • MNT: Add Python 3.12 support (#1057)
  • MNT: Use tox to simplify testing environment setup (#1055)
  • MNT: Bump codecov/codecov-action from 3 to 4 (#1041)
  • MNT: Bump bids-examples from 1a000d6 to eff47f1 (#1039)
  • MNT: Bump bids-examples from b6e5234 to 1a000d6 (#1038)
  • MNT: Bump actions/upload-artifact from 3 to 4 (#1037)

... (truncated)

Commits
  • 623f58d REL: 0.17.2
  • 98cf782 MNT: Update mailmap and Zenodo ordering
  • fdb0cd9 Merge pull request #1088 from cookpa/cookpa-zenodo
  • 4dd026b DOC: Update zenodo.json with new contributer
  • fc692d2 Merge pull request #1085 from bids-standard/dependabot/submodules/bids-exampl...
  • 40c1028 test: Expect citation.cff in ds001
  • b6d1b29 Merge pull request #1087 from cookpa/traverse_link_dirs
  • 6ecffc7 ENH: add a test for datasets with symlinks
  • cdd3bc8 BUG: symlink dirs treated as files during indexing
  • 86c2818 Build(deps): Bump bids-examples from 4460013 to 7c18d68
  • Additional commits viewable in compare view

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Updates the requirements on [pybids](https://github.com/bids-standard/pybids) to permit the latest version.
- [Release notes](https://github.com/bids-standard/pybids/releases)
- [Changelog](https://github.com/bids-standard/pybids/blob/master/CHANGELOG.rst)
- [Commits](bids-standard/pybids@0.0.1...0.17.2)

---
updated-dependencies:
- dependency-name: pybids
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added ignore-for-release PRs that shouldn't be included with release notes. maintenance Issues/PRs related to maintenance. Dependency versions, dependencies, etc. labels Sep 23, 2024
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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 84.34%. Comparing base (ef2dd7e) to head (88559e9).

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #443   +/-   ##
=======================================
  Coverage   84.34%   84.34%           
=======================================
  Files          37       37           
  Lines        3986     3986           
=======================================
  Hits         3362     3362           
  Misses        624      624           

☔ View full report in Codecov by Sentry.
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@tsalo tsalo merged commit 73a8c5d into main Sep 23, 2024
25 checks passed
@dependabot dependabot bot deleted the dependabot/pip/pybids-lte-0.17.2 branch September 23, 2024 14:08
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