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Update smriprep requirement from <=0.16.1 to <=0.17.0 #476

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@dependabot dependabot bot commented on behalf of github Dec 23, 2024

Updates the requirements on smriprep to permit the latest version.

Release notes

Sourced from smriprep's releases.

0.17.0

Release notes

New feature release in the 0.17.x series.

This release improves handling of datasets where T1w images are not the primary modality. It also supports the generation of fsLR meshes on the subject surface with the names:

sub-<label>/anat/sub-<label>_hemi-<L|R>_space-fsLR_den-<label>_<surface>.surf.gii

These are useful for plotting CIFTI results on subject anatomy.

Changes

  • FIX: Stop excluding FS minc_modify_header used during fallback registration (#453)
  • ENH: Output fsLR meshes on subject surfaces (#460)
  • ENH: Support spatial normalization to alternative modalities (#459)
  • ENH: Add t2w_file output to TemplateFlowSelect (#457)
  • MNT: Enable pre-release tests (#461)
  • MNT: Complete transition from flake8/black to ruff (#435)
  • MNT: Adopt src/ layout and tox (#458)

Full Changelog: nipreps/smriprep@0.16.1...0.17.0

Changelog

Sourced from smriprep's changelog.

0.17.0 (December 19, 2024)

New feature release in the 0.17.x series.

This release improves handling of datasets where T1w images are not the primary modality. It also supports the generation of fsLR meshes on the subject surface with the names:

sub-<label>/anat/sub-<label>_hemi-<L|R>_space-fsLR_den-<label>_<surface>.surf.gii

These are useful for plotting CIFTI results on subject anatomy.

  • FIX: Stop excluding FS minc_modify_header used during fallback registration (#453)
  • ENH: Output fsLR meshes on subject surfaces (#460)
  • ENH: Support spatial normalization to alternative modalities (#459)
  • ENH: Add t2w_file output to TemplateFlowSelect (#457)
  • MNT: Enable pre-release tests (#461)
  • MNT: Complete transition from flake8/black to ruff (#435)
  • MNT: Adopt src/ layout and tox (#458)

0.16.1 (August 26, 2024)

A bug-fix release that reworks selection within the FreeSurfer to native segmentation resampling workflow.

  • FIX: Select function in segmentation resampling workflow (#450)

0.16.0 (July 31, 2024)

Start of the 0.16.x minor series.

This release decouples much of the hardcoded T1w behavior in favor of T1w/T2w options, to allow easier integration with tools less reliant on a single anatomical scan.

  • ENH: Use genericised "anat" input/output for TemplateDimensions (#443)
  • ENH: Remove much of the hardcoded T1w fields in favor of anat (#433)
  • RF: Load package data with acres (#448)
  • RF: space-fsaverage to sphere_reg output files (#446)
  • MNT: Unpin libitk 5.3 (ANTs 2.5.3 is built with 5.4) (#445)
  • MNT: Clean up doc builds, environment, style checks (#444)

0.15.0 (March 22, 2024)

New feature release in the 0.15.x series.

This release adds the workflow configuration option and CLI option

... (truncated)

Commits
  • 9636db4 rel(0.17.0): Release notes
  • 55d6246 chore(ci): Set packages-dir for uploads
  • df15b7a chore(ci): Only test sdist once
  • 41afa03 chore(ci): Fix artifact download
  • cf1dcd6 chore(tox): Use unsafe-best-match to fetch pre-release wheels
  • 96e6497 chore: Pin hatchling 1.26 for build
  • 7f2863a Merge pull request #460 from effigies/enh/fslr_surfs
  • 0bf8f89 Merge pull request #461 from effigies/ci/build-and-pre
  • 7e93927 feat: Output fsLR meshes on subject surfaces
  • 2461c54 chore(ci): Enable pre-release builds
  • Additional commits viewable in compare view

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@dependabot dependabot bot added ignore-for-release PRs that shouldn't be included with release notes. maintenance Issues/PRs related to maintenance. Dependency versions, dependencies, etc. labels Dec 23, 2024
Updates the requirements on [smriprep](https://github.com/nipreps/smriprep) to permit the latest version.
- [Release notes](https://github.com/nipreps/smriprep/releases)
- [Changelog](https://github.com/nipreps/smriprep/blob/master/CHANGES.rst)
- [Commits](nipreps/smriprep@0.0.1...0.17.0)

---
updated-dependencies:
- dependency-name: smriprep
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot force-pushed the dependabot/pip/smriprep-lte-0.17.0 branch from 290ca7d to 9e6188a Compare December 23, 2024 19:26
@tsalo
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tsalo commented Jan 2, 2025

Closing in favor of #478.

@tsalo tsalo closed this Jan 2, 2025
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dependabot bot commented on behalf of github Jan 2, 2025

OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting @dependabot ignore this major version or @dependabot ignore this minor version. You can also ignore all major, minor, or patch releases for a dependency by adding an ignore condition with the desired update_types to your config file.

If you change your mind, just re-open this PR and I'll resolve any conflicts on it.

@dependabot dependabot bot deleted the dependabot/pip/smriprep-lte-0.17.0 branch January 2, 2025 14:31
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