Update Dockerfile

PennLINC · Apr 11, 2024 · 05549b8 · 05549b8
1 parent 42100c3
commit 05549b8
Showing 1 changed file with 7 additions and 0 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -176,6 +176,13 @@ COPY --from=afni /opt/afni-latest /opt/afni-latest
 COPY --from=workbench /opt/workbench /opt/workbench
 COPY --from=c3d /opt/convert3d/bin/c3d_affine_tool /usr/bin/c3d_affine_tool
 
+# Download atlases from AtlasPack
+RUN mkdir /AtlasPack
+COPY --from=atlaspack /AtlasPack/tpl-fsLR_*.dlabel.nii /AtlasPack/
+COPY --from=atlaspack /AtlasPack/tpl-MNI152NLin6Asym_*.nii.gz /AtlasPack/
+COPY --from=atlaspack /AtlasPack/atlas-4S*.tsv /AtlasPack/
+COPY --from=atlaspack /AtlasPack/*.json /AtlasPack/
+
 # Simulate SetUpFreeSurfer.sh
 ENV OS="Linux" \
     FS_OVERRIDE=0 \