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change default mrc permissive to false, try to autorecover, remove userfacing 'permissive' argument #140

Merged
merged 18 commits into from
Mar 26, 2024
Merged

change default mrc permissive to false, try to autorecover, remove userfacing 'permissive' argument #140

merged 18 commits into from
Mar 26, 2024

Commits on Mar 5, 2024

  1. change permissive to false, update version and let's see which tests … 

    …break
    @sroet
    sroet committed Mar 5, 2024
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Commits on Mar 6, 2024

  1. Merge branch 'main' into change_mrc_permission_to_strict

    @sroet
    sroet authored Mar 6, 2024
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Commits on Mar 22, 2024

  1. add failing mrc file

    @sroet
    sroet committed Mar 22, 2024
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  2. added tests that should fail

    @sroet
    sroet committed Mar 22, 2024
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  3. Merge branch 'change_mrc_permission_to_strict' of github.com:sroet/py… 

    …tom-template-matching-gpu into change_mrc_permission_to_strict
    @sroet
    sroet committed Mar 22, 2024
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  4. also put default permission pon false for not the header, and make a … 

    …warpper to try to autorecover
    @sroet
    sroet committed Mar 22, 2024
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  5. make sure logs are written

    @sroet
    sroet committed Mar 22, 2024
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  6. add test for completely missing data

    @sroet
    sroet committed Mar 22, 2024
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  7. use filename instead of path for the 'in' assertion

    @sroet
    sroet committed Mar 22, 2024
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  8. count parenthesis properly

    @sroet
    sroet committed Mar 22, 2024
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Commits on Mar 25, 2024

  1. make it an actual f-string

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    sroet committed Mar 25, 2024
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  2. Actually test a corrupt mrc

    @sroet
    sroet committed Mar 25, 2024
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  3. see if we can catch the runtime warnings as well

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    sroet committed Mar 25, 2024
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  4. catch warning on all tests and try to make it work for python<3.11

    @sroet
    sroet committed Mar 25, 2024
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  5. don't precall the function...

    @sroet
    sroet committed Mar 25, 2024
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  6. remove 'permissive' argument from 'read_mrc_meta_data' and 'read_mrc'

    @sroet
    sroet committed Mar 25, 2024
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  7. update version for API break

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    sroet committed Mar 25, 2024
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  8. make contextmanager 'private'

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    sroet committed Mar 25, 2024
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